Detailed information of gene26278.t1 in Actinoscyphia liui

Genomic Location: chr7:46171175...46174019
NR annotation: XP_020897300.1, splicing factor 3B subunit 6 [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9Y3B4Splicing factor 3B subunit 6 OS=Homo sapiens OX=9606 GN=SF3B6 PE=1 SV=1
P59708Splicing factor 3B subunit 6 OS=Mus musculus OX=10090 GN=Sf3b6 PE=1 SV=1
Q9VRV7Splicing factor 3B subunit 6 OS=Drosophila melanogaster OX=7227 GN=Sf3b6 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00076RRM_1RNA recognition motifDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000504DomainRNA recognition motif domainInterproscan
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR050374FamilyRRT5/SRSF/Splicing Factor SRInterproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR034150DomainSF3B6, RNA recognition motifInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23003RNA RECOGNITION MOTIF RRM DOMAIN CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0003729Molecular FunctionmRNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K12833SF3B14; pre-mRNA branch site protein p14-Spliceosomeko03041deepkoala

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