Gene detail

Detailed information of gene24622.t1 in Actinoscyphia liui

Genomic Location: chr7:14615317...14620807
NR annotation: XP_001628298.2, uncharacterized protein LOC5507686 [Nematostella vectensis]

Gene Structure

More details in Jbrowse

Sequence

CDS

gene24622.t1

ATGAACTGGGTTGGTGGAGCAAGAAATCGGATAAAACTCAAACATGAAAGAAAACTTCAAAAGGAATTTTTTGAGAAAAATCGTCATAGTAAGAAAGTTCTTCGTAGTGAAAATCCATCAAAATCTCACCAACTAGACGATGGATCAAAGAGATCCAAGCCAATAAGCCAAGATTTGATAGCATTACAAGCACTTGTAAGTGCACATGACAAACCAAAGGGAAAAATGAGGGAAGTTAGACGACCACTTGCAGTAAACTTGGACGAGCCAAAACGCGCTGGGAAAGACCGCACATATGCCGTAGAGCTACCGGAGTCCCCTGGTCATCATAAACCATCTTTATTAGAGAAGATAGAAGAAAATAAAAAATCTAGGGTGGACGCACCTGAGAGAATCAAGCAATGGATTCCCAAAGTGACTGAAGAGCAAACTTTGACAAAAGCTGAAACATTCAGTACAGCTGATCACCAGGAACAACCAATGATGGTTGATAGGAAACCATTTACCATCAATACATGGGCAGATTTGTCATTGCCTCCACCGCCACTGAAAAAGGATTATGGAAAGGCTGTGTCTTCGAAGCAAACGCTTAACTCAAGCATTGATGCAAAGCCTAATGTAACACAGAGTAAATTTACGCTGGGTCTTTATCCATACTCTTTACAGAGAGACACATTATGTGGAGACAATGTCGGCAATGCTAGTAACATGTTAAGGGGAGATTGTTCTGCAACAAAACAAAATCACGGTGTCAGCAGAGATCATGCTACAGACACTACCTTAGATGAAGAAAAACGTCCTTGTTTTGTAGAGACACAATCTGGAGAGAAAACACCATTGAATTCTTTTGCTGAAGAAACAATACCATCTTCAAGCAAGGAATATAGACACGATAAAGACGGTAACACGTTTAAAACCCCCATACTAGATACCTTCTACGGACGATCAGCATCACCCAGTACATCCACACCTACTCGGGCACTAAGTCCTTCGTTAGGTGCCAAGCCACTCCCCTTAGAAAGTCCGATACAAACATGGACATCACAAAAGGACATTCAGTGGAGTCACTTCAAGATCCATCCAGGACATCCACCCAAGAAAAATCCATTTTTTGACAAAGAGACTGAAATACCAGATCCAGATGCATCCATTATTAAAAGTACACTGGGCAATATACAGGTGCTTCCAAAACCAATAGTCTACCAAGACATCGACCAGAGTGCGGGCAACAGGAAACCCAGCAACATGAAGTTTGGCAACGTTATTGAATGGAACCCTTTTAATATCAGCTATCCTGTGAAGATAGAGGGTAGATCTGGAGGTAGCTCTACGAAACACGGGCAAGAGACAGCATGGAGAACATTTCTTAAGGGCTCTAATGGTTTTCACAGGAACTGTTCTCCTAATCAATCTCAACCACTCCCAACTGTCGCAGAGGAAATGGCTTCAGACCTTAGAAGCGTTACTACCACCAGCTGCTCTTCTAATCCCGATATTGATAAAACCAAAACCTCCAATGAAAATGAAGCACTTAAAGAGGTTATGGACTTAGATAAAGAGGAAGGTCAGTCAAGTGGATTCACATCTTCATGGTCAACACTGACAGACGATGAACAAGAGACGGAGAGCGAGGGGTGTGTTCAACTCCAGACACCTCAAGATGAAATAATTAAGGAACAAAATATATTGAACACGGAGACTTTTGCCAAGACGAATGGAAGTGCGTGTATAAGTGAAGGAGGTACAAAACCGGTAAGCCCTGTGCAACAAATAGTACATGACCACGCCCTACCAAGAAACAGCCCTTCAAGAGTGCTGACCAGATGCACAGACACCATAGACATTTCACTAGACTTACAAAGAGAAGAGCATGGCTTAAAACGATATAAGAAAGTCAAGAAATGTCTGTTTCCATGTGATGATATTGACGATAATATAGCCAACGGCATGGACAGTCTTTACTGTAATGTGGTCCAGCAATCAACGCAGACGGAAGGTTTAAGGTGCTTTCACAGTGAAGTACAGACAGACAGGGCTGCTGAGGGGTGCTTTCACAGAGAAGTACAGGCAGACAGGGCTGCTGAGGGGTGCTTTCACAGAGAAGTACAGACAGACAGGGCTGCTGAGGGGAGCTTTCACAGAGAAGTACAGACAGACAGGGCTGCTGAGGGGTGCTTTCACAGAGAAGTACAGACAGACAGGGCTGCTGAGGTAGATCAAAGTGATGTCGTCGGATCTAAAGAAACGGGCACGCAAACTACATTAGACGAGTTAACAAAAGATAAAAATAGTTACATCATTGAGAATAATCAAGCCAAGAATAGACACTCCCAAGAGGTCGCTACTCAAACGGAAGCAGGAGTTCCCGTTTCGTCTAATACTGGGTGGAGCTGTCAGCAGCAAAAAGAGCAGGCGTCTTATAGAGATCTTTTATCTAGTCAACAAAACATCAGTTGGTATTTGGCATTATTAGTCCAAGTCCTTAATCAACCAGACTGA

Transcript

gene24622.t1

ATGAACTGGGTTGGTGGAGCAAGAAATCGGATAAAACTCAAACATGAAAGAAAACTTCAAAAGGAATTTTTTGAGAAAAATCGTCATAGTAAGAAAGTTCTTCGTAGTGAAAATCCATCAAAATCTCACCAACTAGACGATGGATCAAAGAGATCCAAGCCAATAAGCCAAGATTTGATAGCATTACAAGCACTTGTAAGTGCACATGACAAACCAAAGGGAAAAATGAGGGAAGTTAGACGACCACTTGCAGTAAACTTGGACGAGCCAAAACGCGCTGGGAAAGACCGCACATATGCCGTAGAGCTACCGGAGTCCCCTGGTCATCATAAACCATCTTTATTAGAGAAGATAGAAGAAAATAAAAAATCTAGGGTGGACGCACCTGAGAGAATCAAGCAATGGATTCCCAAAGTGACTGAAGAGCAAACTTTGACAAAAGCTGAAACATTCAGTACAGCTGATCACCAGGAACAACCAATGATGGTTGATAGGAAACCATTTACCATCAATACATGGGCAGATTTGTCATTGCCTCCACCGCCACTGAAAAAGGATTATGGAAAGGCTGTGTCTTCGAAGCAAACGCTTAACTCAAGCATTGATGCAAAGCCTAATGTAACACAGAGTAAATTTACGCTGGGTCTTTATCCATACTCTTTACAGAGAGACACATTATGTGGAGACAATGTCGGCAATGCTAGTAACATGTTAAGGGGAGATTGTTCTGCAACAAAACAAAATCACGGTGTCAGCAGAGATCATGCTACAGACACTACCTTAGATGAAGAAAAACGTCCTTGTTTTGTAGAGACACAATCTGGAGAGAAAACACCATTGAATTCTTTTGCTGAAGAAACAATACCATCTTCAAGCAAGGAATATAGACACGATAAAGACGGTAACACGTTTAAAACCCCCATACTAGATACCTTCTACGGACGATCAGCATCACCCAGTACATCCACACCTACTCGGGCACTAAGTCCTTCGTTAGGTGCCAAGCCACTCCCCTTAGAAAGTCCGATACAAACATGGACATCACAAAAGGACATTCAGTGGAGTCACTTCAAGATCCATCCAGGACATCCACCCAAGAAAAATCCATTTTTTGACAAAGAGACTGAAATACCAGATCCAGATGCATCCATTATTAAAAGTACACTGGGCAATATACAGGTGCTTCCAAAACCAATAGTCTACCAAGACATCGACCAGAGTGCGGGCAACAGGAAACCCAGCAACATGAAGTTTGGCAACGTTATTGAATGGAACCCTTTTAATATCAGCTATCCTGTGAAGATAGAGGGTAGATCTGGAGGTAGCTCTACGAAACACGGGCAAGAGACAGCATGGAGAACATTTCTTAAGGGCTCTAATGGTTTTCACAGGAACTGTTCTCCTAATCAATCTCAACCACTCCCAACTGTCGCAGAGGAAATGGCTTCAGACCTTAGAAGCGTTACTACCACCAGCTGCTCTTCTAATCCCGATATTGATAAAACCAAAACCTCCAATGAAAATGAAGCACTTAAAGAGGTTATGGACTTAGATAAAGAGGAAGGTCAGTCAAGTGGATTCACATCTTCATGGTCAACACTGACAGACGATGAACAAGAGACGGAGAGCGAGGGGTGTGTTCAACTCCAGACACCTCAAGATGAAATAATTAAGATTTTATCGATGATTATATATTAAATAGTTATTATTTGCTTTATCTTGATTCCCAGGAACAAAATATATTGAACACGGAGACTTTTGCCAAGACGAATGGAAGTGCGTGTATAAGTGAAGGAGGTACAAAACCGGTAAGCCCTGTGCAACAAATAGTACATGACCACGCCCTACCAAGAAACAGCCCTTCAAGAGTGCTGACCAGATGCACAGACACCATAGACATTTCACTAGACTTACAAAGAGAAGAGCATGGCTTAAAACGATATAAGAAAGTCAAGAAATGTCTGTTTCCATGTGATGATATTGACGATAATATAGCCAACGGCATGGACAGTCTTTACTGTAATGTGGTCCAGCAATCAACGCAGACGGAAGGTTTAAGGTGCTTTCACAGTGAAGTACAGACAGACAGGGCTGCTGAGGGGTGCTTTCACAGAGAAGTACAGGCAGACAGGGCTGCTGAGGGGTGCTTTCACAGAGAAGTACAGACAGACAGGGCTGCTGAGGGGAGCTTTCACAGAGAAGTACAGACAGACAGGGCTGCTGAGGGGTGCTTTCACAGAGAAGTACAGACAGACAGGGCTGCTGAGGTAGATCAAAGTGATGTCGTCGGATCTAAAGAAACGGGCACGCAAACTACATTAGACGAGTTAACAAAAGATAAAAATAGTTACATCATTGAGAATAATCAAGCCAAGAATAGACACTCCCAAGAGGTCGCTACTCAAACGGAAGCAGGAGTTCCCGTTTCGTCTAATACTGGGTGGAGCTGTCAGCAGCAAAAAGAGCAGGCGTCTTATAGAGATCTTTTATCTAGTCAACAAAACATCAGTTGGTATTTGGCATTATTAGTCCAAGTCCTTAATCAACCAGACTGAACGAACCAGCTGTTAATAAGTTCAGCTCCTGGTTATGATGACAATTTGAAATCATTTAGTTTCTCTTTATTGTGAATGTATATATTTATGTACATGTATTGTGCTTTACCGA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
--	--	--	--	--

InterPro

InterPro term	Type	Description	Source
IPR027883	Family	Regulator of DNA class I crossover intermediates 1-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR35158	CDNA SEQUENCE CN725425	Interproscan

Gene Ontology

GO terms	Category	Description	Source
-	-	-	-