Gene detail

Detailed information of gene24394.t2 in Actinoscyphia liui Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
gene24394.t2	STAR-RELATED LIPID TRANSFER PROTEIN 9	chr7	11376339	11408959	-

Gene Structure

More details in Jbrowse Sequence

CDS

gene24394.t2

ATGGGCTCAAAAGTAAAAGTTGCCGTAAGAGTACGGCCAATGAACCGGCGAGAGGTTGATCTCGGGGATAAAGTCGTGGTTGATATGGTGGATGGCACTCAAACAATTCTGTCTTCCCCGAGAGACAGAAAACAGTCCAAGAATTTTGCCTTTGATCACTGCTTCTGGTCCATTGACTCTACTAACAGTAAATATGCAGACCAAGAAAAAGTGTATGAGTGTTTGGGGAAAGATGTTCTGGAAAATGCATTTGAGGGTTATAATGCATGCATATTTGCTTATGGACAAACAGGTTCTGGTAAGACTTACACTATGATGGGAGGCCATGAAGATAAAGGTGTTATACCAAGGCTGTGTGACAATCTGTTTGCTAGGGTATCAAAGAATGACAACCAGGATGTCAATTACCGTGTTGAAGTATCATACATTGAAATCTACAATGAAAAAGTTCGCGATCTTCTTTGCCCTAGAGGAGGGAACACTGCCCTTCGTGTGAGAGAGCACAAAGTACTGGGACCTTACGTGGAGGGTTTAACTAAGCTTGTTGTGTCATCTTATGAGGATATAGGGACGATAATGGTGGAAGGGAACAAGTCACGTACTGTAGCCGCTACTCGCATGAACACAGAAAGCAGTCGTTCGCATGCAGTATTTAACATTGTACTGGCTAGAACAGAGTATGACCCTGGATCAGAGTGTATTGGTGAGAAGGTCAGTAAAATGAGTCTTGTTGACTTAGCTGGTAGTGAGAGAGCAAGTAAAACAGGAGCTGAAGGAGAAAGACTTAAAGAAGGGAGCAATATCAACAAATCTTTGACTACACTAGGACTAGTTATATCAAGTTTGGCAGACCAGTCATCTGCCAAGCATCACAAGAAAGGAGCTCATTTTGTACCTTATCGAGATTCAATACTGACGTGGTTGCTGAAGGATAATCTTGGTGGAAATAGCAAGACCGTCATGGTTGCTACAATCAGTCCATCAGCTGATAACTATGAAGAGACACTATCAACCCTTAGATATGCTGACCGTGCAAAGAGGATTGTGAACCATGCTGTTGTTAATGAAGATCCTAATGCTAGAATCATCCGTGAGCTCAGAGAAGAAGTTGAACATTTAAAGCAACTGCTTCAGCTGAAAGTAGCTGGCAAGCTGTCTGCTGAAGAAGAAGGTGAATTTGCAATCCAGGAACAGCTTACAGAGAGTGAAAAGCTTATCAAAGAATGCACAATGTCCTGGGAACAGAAAGAGAAGCAGACAGAGCAAATCTTACAGGAACGACACAAAGCTTTGGAAGAAATGGGAATCTCAGTACAGTCATCTGGCATTGCTGTTGAGAAAAGCAAATTTTATTTAGTTAACCTGAATGCAGATCCATCAATGAATGAATTGCTTGTGTATTACTTAAAGGATCATACAAAAGTTGGACGTCTTAATCCAAACTTGCCTCCACCGGACATACAGCTAGGCGGTCTTGGTATACTACCAGAACACAGCACCATGGACATAGAAGGGAATGAAGTCTATCTGGCTTCCATGCCAAATGCCAGAACATTCGTAAATGGTAAAGATGTCACAGAGTCTACTCTACTGAAACATGGTGACAGGATTCTCTGGGGTAATAATCACTTCTTTCGAATCAACTGTCCACGGTCACCTGGTAGCGAAGTCCAGCCTGAACAACATGGTGACTTCATGTCAGCGCAGCACGAACTAATGATGAACCAGATTGTACAAGGTCCCCTACATGAGTCAATCAAGGCGTTAGAAGAACAGTACCAGGCTGATAAACAAGGTGCACTTGAAAAACAGAGATTGATGTATGAAGAGAAAATTGAAGAACTTCGCAACCAAGTTCAAACAAATCGTCCATCTGGCATGGATAGGACTTGGAGTATGGGTTCGTTCAGTTCAGGTTATGGTTCACGCATGTCCTGGTATGATGACAGAGAGACGTCGAATCAGTTTGAGAAGCCCGAGCACCGTCCACTTGTGCTCAAGGAGGCTGTGCTACAAGCTAATACACTTGTCAGAGAGGCCAACCAACTTAGTGAAGAAATGTGCAAGGAGACAGATTTCACCGTCACCTTACAGATTCCTACCTCCAGCTTGAGCTTTGGCAGAAGTCGGTCAGGGTTTAGTAGTGAAGTGGCCATCGTTGTGAAACATAAAAGCAGGGGAACACAAATTTGGTCTCTTGAGAAACTGGAAAACAAAATTTTTGATATGCGAGAGCTGTATAACCAGTGTGTTGACGAAGGTGTTTCATTTAGCAGCAAGGACGAGGACTCTGATTTGTTCTTTGAGGTGGAATGCCACACCCTAATTGGCGTCACCAATGTCTTCCTGGAATGTCTTCTACACGATGTCAGTCACGAATATGCTGCACCAATCATAAGTCAACAAGGAGAGGTCTGTGGTCGACTCAAAGTTGAAGTTTCTCGAATTACAGACAAGGATTCCGACAGCGAATCTGTGGAGTCGACCGAGTCAGACGGCCGAGTAAGTCCAGAAGATGATGAAATAGAAGGAACCAACTTAGAAGACTTCAAACTTGGTCATCGTATGGAGGTCTCTGTGAATGTGATTGAAGCATTCGACCTACCGCCAGCACTGTGCAACTACGTGTTTTGTCAGTACCAGTTGTGGAAGGATAAAGACACTGTGGTTGTTCCCCCAATCAACGCGAGCCTATCTCATCCTGGACCTAAAACTAATACCATGATATTTGAGAACAAACAGGCATTTGATATCGAGATAACGGAAGACTTCCTCGAGTATGCCTCAGAGGGTTCGCTTGCTGTTGAAGTATGGGGAAATCGAAGTCAAGGTTTTGATTCTAATAGTAAACTTAACTGGAATTACAACGTAGAAACACCACAGAAAGGACTCCATGATAGGTGGCACGAACTTGTTCGTAAAATCGATTTCTGGTTCGAAGTGCAAGAGATCAACGATATGGGTGTCTACGCGCCCGTAGAGCTCAACACTCGGGAAGGAAAAGAAACTGGGGGGATCTTCCAGATCCGACAAGGCCACTCCCGCCGCGTGGTAGTCAAAGTGAACCCCATCCCTAAGGCAGGGGCGTTGCCCGTCGTGTGTAACACCATCACCAGTGTGTTGATAGGGAGTATATGTGTTAGGAACAAGCAGCAACAAGAATTGGATAGTTATCAGGAGAAAGATTTGTCATTATTACGAGAGAAGTGGTCCAATTCCTTAATGAAAAGACGTGAATACCTGGATCAGCAAATCCATTCATCCATAGGAAACCCAGATAAGTCAGTTGTGGATAAAGAAAGGGAAAGCTGGTTAATTGACCAGTGGGTTTGTCTAACAGAAGAACGTAACGCTGTTCTTTGTCCTTTACCGGGTAGTGGAATACCGGGTTCACCGCCCCTTGAAGAAAACATTCAGTCAGGTCTGGAAGCACACATTCCTGTCATATTTCTTGACCTCAATGATGATTTTCGAAACGTCGGGGCCGAGGACGTGGGTCCCGCGGGAATTGACTCCACCTTATCGTTTGAAAACCCTGACAACATGATAAACCTGCCAATCATTAAGTATGACCAGAAACAAGTATCGGCGACTGCGTCGTGGGACTCATCCAGTCACGATGCTATTGAACTGACTCGAGTTACAGGCTCTAATGAAAGGGTGTATCTCATCGTGAAGGTTGTTGTTGGACTAACCAGTCCTGTCACCATGGAACTAGTGCTACGTAAGAGGATTTGTGTTCGAATTTACAAAAGGCAAAGTTGGAAAGACAGTTTATTAAGAAGATTATCAAAGGATTTACGATATAGCTGTGGAGTAGTCTACGAACTTCAACCTGGAGAAGAGACGGAGGAGCGGGCAAGTCTCGCACAAATGGCTGCTCAAGCAGTAGGCGAAGAGGAAGAAGACGAAACAGTACTAAAACGATATAGCAGGGGAATATCTAATGTTGAGAGTTTGTTAGCGTTGGACAAACTAAGACAGGAAGTTGTGGTGAAAGAAAAACTTGCTGCTATTGGCAAACCTTTGAGAAAGTTTGCAAGTACACCCAATCTTGCAATGGCGTCTGACTTCTCCTTTGTAAGCAGCAGCCCTGGTCGCTTCGACTCTCCCGAGTCTAGTCGTTTCTTAGATTTTAAAAGTTATGGTTTAAATTCCGACTCTCGACCGAGCCGAAGTTTCACCGGACGAGAAGAGGCATTGATTGATTTACAATCGTACGTGTCGCCTCTCAGTCAAACTAGCACTCCATCAAGTTCAGGAGTTATAATGCGTAACTCAAGTGGCAGACAGCAAAATCCTCGCCCTAGCTCCCTCGTTATTGATTTAGAAACCCTTAATGAAGATTCCAAGGACCCTAGTCCTGAGGTGCACATACCGGGTCTTTTTGACTTTGCTGGTATTAAACTAGAAGTACCCGAAACCTGCACGAGCCCTCTGCCGGACGATCTTCGAGAAAGGACGGCAAGCTCGGATACGATTATTTTTGACGAAGATGCCGCGTTGGTTTACGACGACCTTCCGACGCCGGTGCCGTTTCAGTTTATGAAAGAAAAAGTTACGGATAGTTCCGGAAATGGGCTTAAAACTCAGGAAAAAACACCACAGGAAGCAACACCACAGGATAAAACTCCGGAGAACGACATCTCACTTACGACGAATTCAGAATTGCTTGATATGTTATCAAATGAGAAAATAGAAGCCGAGTCTTGGCCTAAGGCGAATGAGATTTCAACAAATGAAAGTCTACTTCTTGACTTCGGTAATTCAACTGTGGAATCAGAGAAAGGCGATGATATTTCTAAGAATGACTTTACAAATGATTTAATGTCACTAGATAATCCAGTGAATCAGACATTAGAGACATTTGCGCTTACTAATCCATTAGGCGGAGGTCTGGACGATCTCTCGACGACATCTCCACTACCGGACATTCTTACTCCCTCGAAATCCGAGACTGAACCGAATGATTTCGGACAGAACTCGGAGGAGGAGAAGAACTTCCTTTCGACCTCTCGTGACGATCTCTCTTCGTTAGGAAGCAGAGAAGACTTGGCATCGTCTTTAGACAGTTTGGAATGGAATGAATCTTGTCTTGGAAACTTAAAGCCGGGAATGGCCGTTTCGTTGGGCGAGGGAAAGACCGGAGTCATACGATTTACGGGAGCCACGGAGTTTTCCCCCGGGATGTGGGTCGGCGTAGAACTCGACAAACCTGGAGGACGAAATGACGGCTCCATTCAGGGTGTACGCTACTTCGCCTGCAAACCAAGATTTGGTTCGTTCGTTCGTCCCGACAAAATCACCCCCATCGAACACAGCCAACGAGAAAGGAGCACATCGCGTAGAATCACTGGATCACGTGATATGGCCAAAACATCATCCAATAGAGCACTAAATAAAACTGACAGCTCGTCACGGACATCACTTGTAAAGACTACCACTCGAAGACGAACGGACAGTCCTAGTGCCGGAGGTAGATCAGACAGTCCCTCGGGTGCATCCCGTGCCGGTGCGGGACGAGGGGACAATTCTCCCGTCATAAAACGTGACAATGCGGGCTCAAATCGTAAAAAGGACGACTGGAAACGACGGTCGAATATTTTATTTTAA

Transcript

gene24394.t2

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00225	Kinesin	Kinesin motor domain	Domain	Interproscan
PF00498	FHA	FHA domain	Family	Interproscan
PF01302	CAP_GLY	CAP-Gly domain	Domain	Interproscan
PF12423	KIF1B	Kinesin protein 1B	Family	Interproscan
PF12473	DUF3694	Kinesin protein	Family	Interproscan
PF16183	Kinesin_assoc	Kinesin-associated	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000253	Domain	Forkhead-associated (FHA) domain	Interproscan
IPR000938	Domain	CAP Gly-rich domain	Interproscan
IPR001752	Domain	Kinesin motor domain	Interproscan
IPR008984	Homologous_superfamily	SMAD/FHA domain superfamily	Interproscan
IPR019821	Conserved_site	Kinesin motor domain, conserved site	Interproscan
IPR022140	Domain	Kinesin-like KIF1-type	Interproscan
IPR022164	Domain	Kinesin-like	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR032405	Domain	Kinesin-associated	Interproscan
IPR036859	Homologous_superfamily	CAP Gly-rich domain superfamily	Interproscan
IPR036961	Homologous_superfamily	Kinesin motor domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47117	STAR-RELATED LIPID TRANSFER PROTEIN 9	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003777	Molecular Function	microtubule motor activity	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0007018	Biological Process	microtubule-based movement	Interproscan
GO:0008017	Molecular Function	microtubule binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-