Detailed information of gene24331.t1 in Actinoscyphia liui

Genomic Location: chr7:10274431...10295312
NR annotation: XP_031551313.1, DNA topoisomerase 2-alpha-like isoform X1 [Actinia tenebrosa]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O42131DNA topoisomerase 2-beta OS=Gallus gallus OX=9031 GN=TOP2B PE=2 SV=1
Q64399DNA topoisomerase 2-beta OS=Cricetulus longicaudatus OX=10030 GN=TOP2B PE=2 SV=1
Q02880DNA topoisomerase 2-beta OS=Homo sapiens OX=9606 GN=TOP2B PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01751ToprimToprim domainFamilyInterproscan
PF02518HATPase_cHistidine kinase-, DNA gyrase B-, and HSP90-like ATPaseDomainInterproscan
PF16898TOPRIM_CC-terminal associated domain of TOPRIMFamilyInterproscan
PF00521DNA_topoisoIVDNA gyrase/topoisomerase IV, subunit AFamilyInterproscan
PF00204DNA_gyraseBDNA gyrase BDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036890Homologous_superfamilyHistidine kinase/HSP90-like ATPase superfamilyInterproscan
IPR001241FamilyDNA topoisomerase, type IIAInterproscan
IPR001154FamilyDNA topoisomerase II, eukaryotic-typeInterproscan
IPR013760Homologous_superfamilyDNA topoisomerase, type IIA-like domain superfamilyInterproscan
IPR013759Homologous_superfamilyDNA topoisomerase, type IIA, subunit B, C-terminalInterproscan
IPR006171DomainTOPRIM domainInterproscan
IPR003594DomainHistidine kinase/HSP90-like ATPaseInterproscan
IPR031660DomainC-terminal associated domain of TOPRIMInterproscan
IPR002205DomainDNA topoisomerase, type IIA, domain AInterproscan
IPR014721Homologous_superfamilySmall ribosomal subunit protein uS5 domain 2-type fold, subgroupInterproscan
IPR034157DomainDNA topoisomerase 2, TOPRIM domainInterproscan
IPR013758Homologous_superfamilyDNA topoisomerase, type IIA, domain A, alpha-betaInterproscan
IPR020568Homologous_superfamilyRibosomal protein uS5 domain 2-type superfamilyInterproscan
IPR013757Homologous_superfamilyDNA topoisomerase, type IIA, alpha-helical domain superfamilyInterproscan
IPR018522Conserved_siteDNA topoisomerase, type IIA, conserved siteInterproscan
IPR013506DomainDNA topoisomerase, type IIA, subunit B, domain 2Interproscan
IPR050634FamilyDNA Topoisomerase II EnzymeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10169DNA TOPOISOMERASE/GYRASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003918Molecular FunctionDNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006265Biological ProcessDNA topological changeInterproscan
GO:0006259Biological ProcessDNA metabolic processInterproscan
GO:0000712Biological Processresolution of meiotic recombination intermediatesInterproscan
GO:0000819Biological Processsister chromatid segregationInterproscan
GO:0005634Cellular ComponentnucleusInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K03164TOP2; DNA topoisomerase IIEC:5.6.2.2
Chromosome and associated proteinsko03036deepkoala

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