Detailed information of gene24105.t1 in Actinoscyphia liui

Genomic Location: chr7:7312767...7325843
NR annotation: XP_020900736.1, methylcytosine dioxygenase tet3-B [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q6N021Methylcytosine dioxygenase TET2 OS=Homo sapiens OX=9606 GN=TET2 PE=1 SV=3
Q3URK3Methylcytosine dioxygenase TET1 OS=Mus musculus OX=10090 GN=Tet1 PE=1 SV=3
Q8NFU7Methylcytosine dioxygenase TET1 OS=Homo sapiens OX=9606 GN=TET1 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02008zf-CXXCCXXC zinc finger domainDomainInterproscan
PF12851Tet_JBPOxygenase domain of the 2OGFeDO superfamily DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002857DomainZinc finger, CXXC-typeInterproscan
IPR024779Domain2OGFeDO JBP1/TET, oxygenase domainInterproscan
IPR040175FamilyMethylcytosine dioxygenase TET1/2/3Interproscan
IPR046942DomainMethylcytosine dioxygenase TET1-3, oxygenase domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23358UNCHARACTERIZEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006211Biological Processobsolete 5-methylcytosine catabolic processInterproscan
GO:0045944Biological Processpositive regulation of transcription by RNA polymerase IIInterproscan
GO:0070579Molecular Function5-methylcytosine dioxygenase activityInterproscan
GO:0080111Biological Processobsolete DNA demethylationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K24309TET2_3; methylcytosine dioxygenase TET2/3EC:1.14.11.80
Chromosome and associated proteinsko03036deepkoala

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