Detailed information of gene24003.t1 in Actinoscyphia liui

Genomic Location: chr7:6130887...6171097
NR annotation: XP_028513465.1, protein scribble homolog [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q4H4B6Protein scribble homolog OS=Danio rerio OX=7955 GN=scrib PE=1 SV=1
A0A8P0N4K0Protein scribble homolog OS=Canis lupus familiaris OX=9615 GN=SCRIB PE=1 SV=1
Q80U72Protein scribble homolog OS=Mus musculus OX=10090 GN=Scrib PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00595PDZPDZ domainDomainInterproscan
PF00560LRR_1Leucine Rich RepeatRepeatInterproscan
PF13855LRR_8Leucine rich repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001611RepeatLeucine-rich repeatInterproscan
IPR001478DomainPDZ domainInterproscan
IPR036034Homologous_superfamilyPDZ superfamilyInterproscan
IPR003591RepeatLeucine-rich repeat, typical subtypeInterproscan
IPR032675Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR050614FamilySynaptic Scaffolding LAP/MAGUK FamiliesInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23119DISCS LARGEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005912Cellular Componentadherens junctionInterproscan
GO:0009790Biological Processembryo developmentInterproscan
GO:0016323Cellular Componentbasolateral plasma membraneInterproscan
GO:0030054Cellular Componentcell junctionInterproscan
GO:0043113Biological Processreceptor clusteringInterproscan
GO:0045197Biological Processestablishment or maintenance of epithelial cell apical/basal polarityInterproscan
GO:0097120Biological Processreceptor localization to synapseInterproscan
GO:0098609Biological Processcell-cell adhesionInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K16175SCRIB; protein scribble-Human papillomavirus infectionko05165deepkoala

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