Detailed information of gene23926.t1 in Actinoscyphia liui

Genomic Location: chr7:5047948...5054068
NR annotation: XP_020895429.1, DNA polymerase beta [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q27958DNA polymerase beta OS=Bos taurus OX=9913 GN=POLB PE=2 SV=3
P06746DNA polymerase beta OS=Homo sapiens OX=9606 GN=POLB PE=1 SV=3
P06766DNA polymerase beta OS=Rattus norvegicus OX=10116 GN=Polb PE=1 SV=4

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF14791DNA_pol_B_thumbDNA polymerase beta thumb FamilyInterproscan
PF14792DNA_pol_B_palmDNA polymerase beta palm DomainInterproscan
PF14716HHH_8Helix-hairpin-helix domainDomainInterproscan
PF10391DNA_pol_lambd_fFingers domain of DNA polymerase lambdaDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR019843Binding_siteDNA polymerase family X, binding siteInterproscan
IPR003583DomainHelix-hairpin-helix DNA-binding motif, class 1Interproscan
IPR043519Homologous_superfamilyNucleotidyltransferase superfamilyInterproscan
IPR027421Homologous_superfamilyDNA polymerase lambda lyase domain superfamilyInterproscan
IPR029398DomainDNA polymerase beta, thumb domainInterproscan
IPR028207DomainDNA polymerase beta, palm domainInterproscan
IPR002008FamilyDNA polymerase family X, beta-likeInterproscan
IPR010996DomainDNA polymerase beta-like, N-terminal domainInterproscan
IPR037160Homologous_superfamilyDNA polymerase, thumb domain superfamilyInterproscan
IPR022312FamilyDNA polymerase family XInterproscan
IPR002054DomainDNA-directed DNA polymerase XInterproscan
IPR018944DomainDNA polymerase lambda, fingers domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11276DNA POLYMERASE TYPE-X FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016779Molecular Functionnucleotidyltransferase activityInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0003887Molecular FunctionDNA-directed DNA polymerase activityInterproscan
GO:0006284Biological Processbase-excision repairInterproscan
GO:0006303Biological Processdouble-strand break repair via nonhomologous end joiningInterproscan
GO:0034061Molecular FunctionDNA polymerase activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K02330POLB; DNA polymerase betaEC:2.7.7.7
EC:4.2.99.-
DNA repair and recombination proteinsko03400deepkoala

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