Detailed information of gene23844.t1 in Actinoscyphia liui

Genomic Location: chr7:3638221...3650182
NR annotation: XP_028513457.1, protein ZGRF1 [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q86YA35'-3' DNA helicase ZGRF1 OS=Homo sapiens OX=9606 GN=ZGRF1 PE=1 SV=3
Q0VGT45'-3' DNA helicase ZGRF1 OS=Mus musculus OX=10090 GN=Zgrf1 PE=1 SV=2
Q9VYS3Regulator of nonsense transcripts 1 homolog OS=Drosophila melanogaster OX=7227 GN=Upf1 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00307CHCalponin homology (CH) domainDomainInterproscan
PF13087AAA_12AAA domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001715DomainCalponin homology domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR036872Homologous_superfamilyCH domain superfamilyInterproscan
IPR041679DomainDNA2/NAM7 helicase-like, C-terminalInterproscan
IPR047187DomainUpf1-like, C-terminal helicase domainInterproscan
IPR045055FamilyDNA2/NAM7-like helicaseInterproscan
IPR003096FamilySmooth muscle protein/calponinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10887DNA2/NAM7 HELICASE FAMILYInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0000184Biological Processnuclear-transcribed mRNA catabolic process, nonsense-mediated decayInterproscan
GO:0003724Molecular FunctionRNA helicase activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan

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