Detailed information of gene23599.t3 in Actinoscyphia liui

Genomic Location: chr6:47115995...47132902
NR annotation: XP_020911481.1, polypyrimidine tract-binding protein 1 [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q91Z31Polypyrimidine tract-binding protein 2 OS=Mus musculus OX=10090 GN=Ptbp2 PE=1 SV=2
Q66H20Polypyrimidine tract-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Ptbp2 PE=1 SV=1
Q9UKA9Polypyrimidine tract-binding protein 2 OS=Homo sapiens OX=9606 GN=PTBP2 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF11835RRM_8RRM-like domainDomainInterproscan
PF00076RRM_1RNA recognition motifDomainInterproscan
PF13893RRM_5RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR021790DomainPTBP1-like, RNA recognition motif 2Interproscan
IPR000504DomainRNA recognition motif domainInterproscan
IPR006536FamilyHnRNP-L/PTBInterproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15592MATRIN 3/NUCLEAR PROTEIN 220-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006397Biological ProcessmRNA processingInterproscan
GO:0003729Molecular FunctionmRNA bindingInterproscan
GO:0043484Biological Processregulation of RNA splicingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan

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