Detailed information of gene23301.t1 in Actinoscyphia liui

Genomic Location: chr6:43193717...43201966
NR annotation: XP_020915737.1, phenylalanine--tRNA ligase alpha subunit [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q1JPX3Phenylalanine--tRNA ligase alpha subunit OS=Danio rerio OX=7955 GN=farsa PE=2 SV=2
Q505J8Phenylalanine--tRNA ligase alpha subunit OS=Rattus norvegicus OX=10116 GN=Farsa PE=1 SV=1
Q6AZG6Phenylalanine--tRNA ligase alpha subunit A OS=Xenopus laevis OX=8355 GN=farsa-a PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01409tRNA-synt_2dtRNA synthetases class II core domain (F)DomainInterproscan
PF18553PheRS_DBD3PheRS DNA binding domain 3DomainInterproscan
PF18554PheRS_DBD2PheRS DNA binding domain 2DomainInterproscan
PF18552PheRS_DBD1PheRS DNA binding domain 1 DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006195DomainAminoacyl-tRNA synthetase, class IIInterproscan
IPR002319DomainPhenylalanyl-tRNA synthetaseInterproscan
IPR004529FamilyPhenylalanyl-tRNA synthetase, class IIc, alpha subunitInterproscan
IPR045864Homologous_superfamilyClass II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)Interproscan
IPR040725DomainPheRS, DNA binding domain 3Interproscan
IPR040586DomainPheRS DNA binding domain 2Interproscan
IPR040724DomainPheRS, DNA binding domain 1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11538PHENYLALANYL-TRNA SYNTHETASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000049Molecular FunctiontRNA bindingInterproscan
GO:0004812Molecular Functionaminoacyl-tRNA ligase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0043039Biological ProcesstRNA aminoacylationInterproscan
GO:0000166Molecular Functionnucleotide bindingInterproscan
GO:0004826Molecular Functionphenylalanine-tRNA ligase activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006432Biological Processphenylalanyl-tRNA aminoacylationInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0009328Cellular Componentphenylalanine-tRNA ligase complexInterproscan

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