Detailed information of gene23215.t1 in Actinoscyphia liui

Genomic Location: chr6:41924449...41931756
NR annotation: KXJ15947.1, MutS protein-like 5 [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9QUM7MutS protein homolog 5 OS=Mus musculus OX=10090 GN=Msh5 PE=1 SV=1
O43196MutS protein homolog 5 OS=Homo sapiens OX=9606 GN=MSH5 PE=1 SV=1
Q6MG62MutS protein homolog 5 OS=Rattus norvegicus OX=10116 GN=Msh5 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00488MutS_VMutS domain VDomainInterproscan
PF05190MutS_IVMutS family domain IVDomainInterproscan
PF05192MutS_IIIMutS domain IIIDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR007696DomainDNA mismatch repair protein MutS, coreInterproscan
IPR000432DomainDNA mismatch repair protein MutS, C-terminalInterproscan
IPR007861DomainDNA mismatch repair protein MutS, clampInterproscan
IPR045076FamilyDNA mismatch repair MutS familyInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR036187Homologous_superfamilyDNA mismatch repair protein MutS, core domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11361DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006298Biological Processmismatch repairInterproscan
GO:0030983Molecular Functionmismatched DNA bindingInterproscan
GO:0003690Molecular Functiondouble-stranded DNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0051026Biological Processchiasma assemblyInterproscan
GO:0140664Molecular FunctionATP-dependent DNA damage sensor activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K08741MSH5; DNA mismatch repair protein MSH5-Chromosome and associated proteinsko03036deepkoala

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