Detailed information of gene23173.t2 in Actinoscyphia liui

Genomic Location: chr6:41417484...41438504
NR annotation: XP_031554999.1, uncharacterized protein LOC116291905 [Actinia tenebrosa]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q28F72Cyclin-C OS=Xenopus tropicalis OX=8364 GN=ccnc PE=2 SV=1
Q4KLA0Cyclin-C OS=Xenopus laevis OX=8355 GN=ccnc PE=2 SV=1
P55168Cyclin-C OS=Gallus gallus OX=9031 GN=CCNC PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00773RNBRNB domainDomainInterproscan
PF13087AAA_12AAA domainDomainInterproscan
PF13086AAA_11AAA domainDomainInterproscan
PF00134Cyclin_NCyclin, N-terminal domainDomainInterproscan
PF16899Cyclin_C_2Cyclin C-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR045055FamilyDNA2/NAM7-like helicaseInterproscan
IPR047187DomainUpf1-like, C-terminal helicase domainInterproscan
IPR022966Conserved_siteRibonuclease II/R, conserved siteInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR012340Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan
IPR001900DomainRibonuclease II/RInterproscan
IPR036915Homologous_superfamilyCyclin-like superfamilyInterproscan
IPR041679DomainDNA2/NAM7 helicase-like, C-terminalInterproscan
IPR013763DomainCyclin-like domainInterproscan
IPR026122DomainHelicase MOV-10/SDE3, DEXXQ/H-box helicase domainInterproscan
IPR003593DomainAAA+ ATPase domainInterproscan
IPR041677DomainDNA2/NAM7 helicase, helicase domainInterproscan
IPR006671DomainCyclin, N-terminalInterproscan
IPR031658DomainCyclin, C-terminal domain 2Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10887DNA2/NAM7 HELICASE FAMILYInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005829Cellular ComponentcytosolInterproscan
GO:0035194Biological Processregulatory ncRNA-mediated post-transcriptional gene silencingInterproscan
GO:0043186Cellular ComponentP granuleInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0004540Molecular FunctionRNA nuclease activityInterproscan
GO:0032574Molecular Function5'-3' RNA helicase activityInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0004386Molecular Functionhelicase activityInterproscan

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