Detailed information of gene23073.t2 in Actinoscyphia liui

Genomic Location: chr6:39754622...39774643
NR annotation: XP_020906157.1, E3 ubiquitin-protein ligase Rnf220 [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q5VTB9E3 ubiquitin-protein ligase RNF220 OS=Homo sapiens OX=9606 GN=RNF220 PE=1 SV=1
Q6PDX6E3 ubiquitin-protein ligase Rnf220 OS=Mus musculus OX=10090 GN=Rnf220 PE=1 SV=1
Q8HXD5E3 ubiquitin-protein ligase RNF220 OS=Macaca fascicularis OX=9541 GN=RNF220 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13923zf-C3HC4_2Zinc finger, C3HC4 type (RING finger)DomainInterproscan
PF15926RNF220E3 ubiquitin-protein ligase RNF220FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR040178DomainE3 ubiquitin-protein ligase RNF220, RING fingerInterproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR052443FamilyE3 ubiquitin-protein ligase RNF220-likeInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR031824DomainE3 ubiquitin-protein ligase RNF220, middle domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13459UNCHARACTERIZEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004842Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0046872Molecular Functionmetal ion bindingInterproscan
GO:0016567Biological Processprotein ubiquitinationInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K25174RNF220; E3 ubiquitin-protein ligase RNF220EC:2.3.2.27
Ubiquitin systemko04121deepkoala

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