Detailed information of gene22842.t1 in Actinoscyphia liui Gene info
Gene IDAnnotationChromosomeStartEndStrand
gene22842.t1S-LAYER PROTEINchr63565281035661086-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00084SushiSushi repeat (SCR repeat)DomainInterproscan
PF00353HemolysinCabindRTX calcium-binding nonapeptide repeat (4 copies)RepeatInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000436DomainSushi/SCR/CCP domainInterproscan
IPR001190DomainSRCR domainInterproscan
IPR001343RepeatRTX calcium-binding nonapeptide repeatInterproscan
IPR003995FamilyRTX toxin determinant AInterproscan
IPR011049Homologous_superfamilySerralysin-like metalloprotease, C-terminalInterproscan
IPR018511Conserved_siteHemolysin-type calcium-binding conserved siteInterproscan
IPR035976Homologous_superfamilySushi/SCR/CCP superfamilyInterproscan
IPR050557FamilyRTX toxin and mannuronan C5-epimeraseInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR38340S-LAYER PROTEINInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0005576Cellular Componentextracellular regionInterproscan
GO:0016020Cellular ComponentmembraneInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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TOP