Detailed information of gene22759.t1 in Actinoscyphia liui

Genomic Location: chr6:33823597...33832094
NR annotation: XP_031556310.1, U2 small nuclear ribonucleoprotein A'-like [Actinia tenebrosa]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P09661U2 small nuclear ribonucleoprotein A' OS=Homo sapiens OX=9606 GN=SNRPA1 PE=1 SV=2
Q4R8Y8U2 small nuclear ribonucleoprotein A' OS=Macaca fascicularis OX=9541 GN=SNRPA1 PE=2 SV=1
P57784U2 small nuclear ribonucleoprotein A' OS=Mus musculus OX=10090 GN=Snrpa1 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF14580LRR_9Leucine-rich repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR032675Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR001611RepeatLeucine-rich repeatInterproscan
IPR003603DomainU2A'/phosphoprotein 32 family A, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10552U2 SMALL NUCLEAR RIBONUCLEOPROTEIN AInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0000398Biological ProcessmRNA splicing, via spliceosomeInterproscan
GO:0005686Cellular ComponentU2 snRNPInterproscan
GO:0030620Molecular FunctionU2 snRNA bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11092SNRPA1; U2 small nuclear ribonucleoprotein A'-Spliceosomeko03041deepkoala

TOP