Gene detail

Detailed information of gene22232.t1 in Actinoscyphia liui

Genomic Location: chr6:24792683...24799022
NR annotation: XP_022808550.1, uncharacterized protein LOC111345528 [Stylophora pistillata]

Gene Structure

More details in Jbrowse

Sequence

CDS

gene22232.t1

ATGAGGGACTCTAATGAAACATCAAAAGAGACAATTTCGAAAATTTTGGACTTAGAAGAAAGGCCAAAAACGCCATCACTCGAACGTGAACAGATTGAATCAGAATCTATTTTCGAAAAGCAAAGCGTGACAGGCGAGCTATTAGCCACGAAACCCGTGGGCTACGTCATGGACACGGAATGGCTTTTGGAAGCCCGTCCTACGATAGCCACGGAAACTACAAACCATACCGATAAAGAACATGTAGATTTCGAACCACAAACACGCGAAAGAAAGCTAACTGAGAAAGGAAAGGCTTATCGTATCGAAACGCTAAACCGCAAACGACATAACGCTGGCTTAACTCTGTCAAAGGAGATAAGGAACGTTCACGCGTCGTTGACGTTGACAACACTCGAAAGATTAAGAAATCGCTTAGACTCGTTGAAAGACGATGCAACACAGGCTCATCACGCCTTTCATGAAACCATAGATGATGAGAACGAAAAACTAGAGTCGTATTCGTGGTTTGACATCCGTGATAGAGAGTTCACCGAGTGTCGCATGAAGTTAACTGAACGAATACGAGCTTTAGAGAAGAAACTTTACGCTGCCAGTTCAATTAGATCCGTCAATTCGAGACACAGTGCAGGCTCAAACAGTTCTAGAAACTCAGCCCGCTCGTTAAGGCTCAAGGCAGCGGCAAAGTCCGCCAGATTTAAGGCCGAGATGAGTTTCCTAGACAACGAAAAGGAGCGGAGGCGCCTACAACTATTAAAGGAGATAGCTGTCGCCGATGCTGAAGAGCACGCAATTAAGCAGATCATTAACGAAGAAACTGATAATCTAAATGGTGCTAGCTGCTTAAAACGCGAACTAGAAATTAACTCAGAAGTCAAACAAGAGACAAATAAAACAATTGATCCGTCAGTAAAACCTTTTGAGCCAGGGGTACTCCCCTCGCCCAGGCCAATTCAAGAGCCTGCGAAACCAGTAGCAAAAACTGTACAGGACATGCCCACAAAAACGGATCAAACAGGAAAAGGGAAAAGAGGAGGATCATCTGCAGCAGGCAGCTTCGCTACTAACACGTCAACAGCACCGACACAACACGCAAGTCGTCAGGCAAGCCAATGCCATCTGTGCAAGAAGGCAGGGCACATCCTCGATAAGTGTTTCGCCTTCAAAGCCAAGAATGAAGACGAACGCCGAGAATTCGTTAGTACGAATGGTCTGTGTTTTGGCTGCCTTGGGAAAGGTCACCTTTCTATAAGTTGTCAGTCAAGGCTTACTTGTGAAGAATGTGGCAAGCCTCATCCTACTGCACTGCATGGCGTGAAACCAAAACGTAGGATAAACAGAAGTCAGCAATCTAGTCATCGACAAACCTCTGACAACCCGTCTAACCCTAGATCGCAGCCTCACTACAAGGCAACAAAGACACCAGGCGAAGATAATACGTCAGGCGCTGAATCTGCTAATTCGAATGTCAATAGCCCCAGCCTAGTTGAAAGACTAGAGTATTTTTCTGACTGGTATCGTGCAAAGAGAGCGGTTGCCCTGTGTCGACGATACGTAAGCATTCTACAATCGAAAGTCAATAAGACGTCAAGACTAAGATACCCCAGAAGTAAGGGTAAGCAAGGTCAAGTGACGCTGATTAGAGTTCAAGAGCTGAGAGACGCCGAGATCGTCATAATCAAGGCTGTCCAGAGAGTAACGCCACCGGATATCACGCCATCAGGCTCTCTCAGCAAGCTCGACCCTATTATAGACTCGGATGGCGTAATTAGAGTAGGAGGTCGACTGAAGTTTTCATCTCTACCTAACAGCTCTAAACACCCAGCTATCCTGCCAAGATATGGCCACATCACAGATCTAGTAATCAGGTATTACCACGCCAAAGTGCAGCACCAGGGGAGAGGTATCACTATGAACGAGGTACGTGCAAGTGGGTACTGGGTAATCGGAGCATCTGCAGCAGTATCGAGAGCAATATCCAAGTGCGTCACGTGTCGAAAGATGCGAGGCGTTGTTCAGGAACAACGTGATGAAGGCCTACCACGCAACCAGTGGCAGCTCGCGCGTATAGCTGAGAGTGCCGAGAGTGCCGAGAGTGCCGAGAGTGCCGACGGCTACGTGCGCACAGTGAAAGTCACCATGGCAGACCGTACCATCGACGGCAAGGGCAAGAGAACCAAGCCTGCAAGGGCTTTGGAACGTCCAATACAGAAGTTGGTGCTGTTACAGGAGAAAGAAATCTGA

Transcript

gene22232.t1

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
--	--	--	--	--

InterPro

InterPro term	Type	Description	Source
IPR001878	Domain	Zinc finger, CCHC-type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22955	RETROTRANSPOSON	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan