Detailed information of gene21952.t1 in Actinoscyphia liui

Genomic Location: chr6:19691031...19756144
NR annotation: XP_031569217.1, uncharacterized protein LOC116303758 isoform X3 [Actinia tenebrosa]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
G3V801Neurotrypsin OS=Rattus norvegicus OX=10116 GN=Prss12 PE=1 SV=1
O08762Neurotrypsin OS=Mus musculus OX=10090 GN=Prss12 PE=1 SV=1
Q5G266Neurotrypsin OS=Trachypithecus phayrei OX=61618 GN=PRSS12 PE=3 SV=1
 Gene family
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|U-box

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04564U-boxU-box domainDomainInterproscan
PF00431CUBCUB domainDomainInterproscan
PF00057Ldl_recept_aLow-density lipoprotein receptor domain class ARepeatInterproscan
PF01822WSCWSC domainDomainInterproscan
PF00629MAMMAM domain, meprin/A5/muDomainInterproscan
PF00530SRCRScavenger receptor cysteine-rich domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036772Homologous_superfamilySRCR-like domain superfamilyInterproscan
IPR002889DomainCarbohydrate-binding WSCInterproscan
IPR003613DomainU-box domainInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR001190DomainSRCR domainInterproscan
IPR000859DomainCUB domainInterproscan
IPR036055Homologous_superfamilyLDL receptor-like superfamilyInterproscan
IPR002172RepeatLow-density lipoprotein (LDL) receptor class A repeatInterproscan
IPR000998DomainMAM domainInterproscan
IPR035914Homologous_superfamilySpermadhesin, CUB domain superfamilyInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR050686FamilySRCR-S1 Scavenger ReceptorInterproscan
IPR017448DomainSRCR-like domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR48071SRCR DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016020Cellular ComponentmembraneInterproscan
GO:0004842Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0016567Biological Processprotein ubiquitinationInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

TOP