Gene detail

Detailed information of gene21574.t1 in Actinoscyphia liui Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
gene21574.t1	PUR-TRANSCRIPTIONAL ACTIVATOR	chr6	11936730	11949107	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

gene21574.t1

GAAGGAATAAGAGAAATGGCTGCCACCGGTGATGGAGTAAATGAAGGGGATTACACCGACCAGAGGCCCAGCAATGTTGAAGGGGATGAAGAACTCATGAGCAAGAGCTTGCAGATCCAGTCCAAGCGTTTTTATATTGACTTGAAGAGCAATCGTCGCGGAAAGTATATTAAAATCAGCGAGGTATCCACCAACAGGAATTTGAAACGCAAAATCATCTTGACTGTGGGATGTGGAAGAGAACTGCGTGACAAGTTGACAATCTTTGCAGAGTTTCTGGCTCAACAAGATACTGGCTCATCTAAATCCGAGGAAGCAGCTGTACCAGAAGATGGCCGCCTGAAAAGCGAGATGATCAATGGTGAAACCAAGAGGTACTATCTTGACTTGAAGGAGAATAACCGTGGTCGGTTCTTAAAGGTCAGCCAAGCACCCCTGTCCCGTGGGCGTGGTGCCATGCGTAAGGAGATAGCCATACCCGCCCAGGGCATTGTGGACATCAGGAACAACTTGTCTGAAATCCTGGAAGAGTGTGGCTCTGATGACGAGGAGTCCCGCGTTTTGCCAAAGTCATGCGAACTACGAGTGGAGCAGAAGAAATTCTACTTTGATGTTGGCAATAATGCACGTGGGGTTTTCCTAAGGATCTCTGAGGTAACTGCGAATTATCGTACATCTATTACTATTCCTAAGGTTGGATGGGCGCGGGTACGAGACACTATTGGTGATATGTTGGACGGCATGGAAGGGGAGGACTGAACCTTACACTTCGTGTTTGCAATTCAGTAGCATGTTCTATAATTGTTCCCGATTGGTCGATTTGCACGATGACGTCATTGGACAACCAGAATGCTTTGCGAGGTCTCTTTAGGAATTCATGTCTGTTTGAATCTTATGAAAACAGTTTACAAAATTGGCTCATATACAGCTGGCTGCCAAAAGCCAAGTTTTGTGAAAGGTTTCGCTTATTGTTGATGATCACTAGATCTTTTTTAAGCCTGCGCACACATTTATTTGCTAGTCAGCGGATGCCTTCTTATGCACAGACAGGGCCACAATGGGTTACTGGATGACAGCTTACAACTCGCCTCCATATAATCTTAATATAATATAAGCATCATAAAAGTAATGTTGATTTCTCTTGTACTCCATTGACTAATGATTTATGGTCGCAAAGGATTCTGGTCGTCAAAGAAGTGTGACGTCATCTTGCAAATTAAGTATTCGATATTCGAAAAAAAAAATTACTTTTAGACTGTAATTACGAAATAACAGCGACACTTATTAGTAACTTCTGGGTCGAATAGTTAGTGAAAATATTTGTACATTGCGTAAAACACAACAACGACCTCCCTTGGCTTCCTTTGCTGAGGTAGAGATGGACTGGGGACGAGGAAGAATCTCATTTTCTTCCCAGTCTCGCTCCTACTTGCCTTAACACAGGGAGCCCAATTGTAAAACGAGAGCGTTTTCAATATTTTCTCTTACTTTCCTTTTGAAGAGCCCGTTTCATTAATTAATCTATTATTTTTTGGGGACACCGACGGGTAATTACTAAGCATGAATACAGCGCGCTATAATCATTTATATTCGACATGTTCTAAACGACTTTGGGAACCTAGGTTCGAGCTGCGATCGAAGGGCATCTATGGACCGTTTGGAGAACAGACTCGCCATTTTTCAAAACAAAGTACAGCAGAAGAAGAAACTAGCGATGACTCACTACAACTGTTGCGTTCCTGGCTGCACAGTATATCTTCCATATACTTCTTAGTGTTGTTGTCCCTCCAAACAATCCATAGATGCTCTGCGATCGATCGGGTTCCCACTCGTTTCTAACATGGCGAATTTAGAATCTTACAATTGTACAGTGGTATATATCCTCGCTTTTTTCGAGGGGTCAGCCTAACCCCCTGAATTTTCTCTTCTTAGGGAAAGTGTGCAGGGAAGTGTGCAGTCCCGCTAGAGCTGATTTCGTATGACTGTGAAAAGCTCCGTGTCGTGTCGTGTCTCGACCTTTTGATTGGGCGAGAAATTTTTCTGACCAATCAAAACGTTGAGACTCGGCAGGGCACGGAGTTTTTCACAGTCATGCGAAATCAGCTCTATCACAAACTCACCGCTACCCCAATTACTAACCCATGTATATTGTTTGGTTATCATGAACCCTGCTATTACGAACAATTTTACGACTCCTGGGGGAATTTGAGACAGTGGGGTTCATAAGTGAATCTCTTGTCTTCTAGGACTTGAAGCCTCGGGAACGAGCTAGGATATATATGTGATTTTGAGTCTTGCTCTTTTACAAGGCTCCATCCCATCCACCAAACGAGAGTTAGCACAGTATGGAAATACTTTCAAAAACATTCAATAATCTTCAGTGAAACATTCAGTAATCTTTCCCGCGTCTCCGATTTAGACAAGATAAGGCGTGGTTACATAGCTATCTCTTAGGTGTATGTGGACTACAGTATTTTGAGGCAGCGGTGAAAACGTACTGTCATGCGCAATCGAGCTCATTATCGTAGATTTTTCTTCCGCCTGCAATTATATATTCAAACGTCGATCCTGTTTTACGATCAAATGGGCGTGCGCAGTACGTTTTACCGCTGGCCTTGACCCCTTTATTGAGTTTCCTTGGAATCGTGAAGTCAGGCAAAAATTGTTTAGTTTTGAGCGAGGTGGCAGCATATGAGTACCACACTCTGCATGGGCAACAACAGCAGCAGCAGTAGCGTGGCAATAAACTTGTTGAAAGACCTTTAATATTGTAGTAATATTGTACCTATAGTTATTAGATCAGAGGAAAATGGTTATGAAATTCGGACTCACAAAGGAGCAAACATGGAGGTTGAGTAGGTCCTTGAC

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04845	PurA	PurA ssDNA and RNA-binding protein	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006628	Family	Purine-rich element binding protein family	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12611	PUR-TRANSCRIPTIONAL ACTIVATOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000977	Molecular Function	RNA polymerase II transcription regulatory region sequence-specific DNA binding	Interproscan
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0032422	Molecular Function	purine-rich negative regulatory element binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-