Detailed information of gene21479.t1 in Actinoscyphia liui

Genomic Location: chr6:9587668...9594526
NR annotation: XP_020906139.1, endoribonuclease LACTB2 [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q0V9A9Endoribonuclease LACTB2 OS=Xenopus tropicalis OX=8364 GN=lactb2 PE=2 SV=1
Q5XGR8Endoribonuclease LACTB2 OS=Xenopus laevis OX=8355 GN=lactb2 PE=2 SV=1
Q6NYF0Endoribonuclease LACTB2 OS=Danio rerio OX=7955 GN=lactb2 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF17778BLACT_WHBeta-lactamase associated winged helix domainDomainInterproscan
PF00753Lactamase_BMetallo-beta-lactamase superfamilyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR001279DomainMetallo-beta-lactamaseInterproscan
IPR041516DomainLACTB2, winged helix domainInterproscan
IPR050662FamilySecondary metabolite biosynthesis-associated thioesteraseInterproscan
IPR036866Homologous_superfamilyRibonuclease Z/Hydroxyacylglutathione hydrolase-likeInterproscan
IPR047921DomainLACTB2-like, MBL-fold metallo hydrolase domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23131ENDORIBONUCLEASE LACTB2Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003727Molecular Functionsingle-stranded RNA bindingInterproscan
GO:0004521Molecular FunctionRNA endonuclease activityInterproscan
GO:0005759Cellular Componentmitochondrial matrixInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K16639LACTB2; endoribonuclease LACTB2EC:3.1.27.-
Mitochondrial biogenesisko03029deepkoala

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