Detailed information of gene20930.t1 in Actinoscyphia liui

Genomic Location: chr5:55294757...55335644
NR annotation: XP_048586401.1, vacuolar protein sorting-associated protein 54 [Nematostella vectensis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9P1Q0Vacuolar protein sorting-associated protein 54 OS=Homo sapiens OX=9606 GN=VPS54 PE=1 SV=2
Q5SPW0Vacuolar protein sorting-associated protein 54 OS=Mus musculus OX=10090 GN=Vps54 PE=1 SV=1
Q9JMK8Vacuolar protein sorting-associated protein 54 OS=Rattus norvegicus OX=10116 GN=Vps54 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07928Vps54Vps54-like proteinFamilyInterproscan
PF10475Vps54_NVacuolar-sorting protein 54, of GARP complex RepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR039745FamilyVacuolar protein sorting-associated protein 54Interproscan
IPR012501DomainVacuolar protein sorting-associated protein 54, C-terminalInterproscan
IPR019515DomainVacuolar protein sorting-associated protein 54, N-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12965VACUOLAR PROTEIN SORTING 54Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000938Cellular ComponentGARP complexInterproscan
GO:0006896Biological ProcessGolgi to vacuole transportInterproscan
GO:0019905Molecular Functionsyntaxin bindingInterproscan
GO:0042147Biological Processretrograde transport, endosome to GolgiInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K17600VPS54; vacuolar protein sorting-associated protein 54-Membrane traffickingko04131deepkoala

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