Detailed information of gene20478.t1 in Actinoscyphia liui

Genomic Location: chr5:47483620...47499750
NR annotation: XP_020899612.1, transcription factor IIIB 90 kDa subunit [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q92994Transcription factor IIIB 90 kDa subunit OS=Homo sapiens OX=9606 GN=BRF1 PE=1 SV=1
Q8CFK2Transcription factor IIIB 90 kDa subunit OS=Mus musculus OX=10090 GN=Brf1 PE=1 SV=1
Q9P6R0Transcription factor IIIB 60 kDa subunit OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=brf1 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08271TF_Zn_RibbonTFIIB zinc-bindingDomainInterproscan
PF07741BRF1Brf1-like TBP-binding domainDomainInterproscan
PF00382TFIIBTranscription factor TFIIB repeatDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013763DomainCyclin-like domainInterproscan
IPR013137DomainZinc finger, TFIIB-typeInterproscan
IPR000812FamilyTranscription factor TFIIBInterproscan
IPR011665DomainBrf1, TBP-binding domainInterproscan
IPR036915Homologous_superfamilyCyclin-like superfamilyInterproscan
IPR013150DomainTranscription factor TFIIB, cyclin-like domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11618TRANSCRIPTION INITIATION FACTOR IIB-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000126Cellular Componenttranscription factor TFIIIB complexInterproscan
GO:0000995Molecular FunctionRNA polymerase III general transcription initiation factor activityInterproscan
GO:0001006Molecular FunctionRNA polymerase III type 3 promoter sequence-specific DNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006352Biological ProcessDNA-templated transcription initiationInterproscan
GO:0006383Biological Processtranscription by RNA polymerase IIIInterproscan
GO:0070897Biological Processtranscription preinitiation complex assemblyInterproscan
GO:0097550Cellular Componenttranscription preinitiation complexInterproscan
GO:0017025Molecular FunctionTBP-class protein bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K15196BRF1, GTF3B; transcription factor IIIB 90 kDa subunit-Transcription machineryko03021deepkoala

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