Detailed information of gene20238.t1 in Actinoscyphia liui

Genomic Location: chr5:43355696...43359508
NR annotation: XP_020896883.1, tRNA 2'-phosphotransferase 1 [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q5EAR5tRNA 2'-phosphotransferase 1 OS=Danio rerio OX=7955 GN=trpt1 PE=2 SV=2
Q86TN4tRNA 2'-phosphotransferase 1 OS=Homo sapiens OX=9606 GN=TRPT1 PE=1 SV=2
Q3ZBM7tRNA 2'-phosphotransferase 1 OS=Bos taurus OX=9913 GN=TRPT1 PE=2 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01885PTS_2-RNARNA 2'-phosphotransferase, Tpt1 / KptA familyFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR042081Homologous_superfamilyRNA 2'-phosphotransferase, C-terminal domainInterproscan
IPR002745FamilyPhosphotransferase KptA/Tpt1Interproscan
IPR042080Homologous_superfamilyRNA 2'-phosphotransferase, N-terminal domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12684PUTATIVE PHOSPHOTRANSFERASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000215Molecular FunctiontRNA 2'-phosphotransferase activityInterproscan
GO:0006388Biological ProcesstRNA splicing, via endonucleolytic cleavage and ligationInterproscan
GO:0008033Biological ProcesstRNA processingInterproscan
GO:0016740Molecular Functiontransferase activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K10669TRPT1, TPT1; 2'-phosphotransferaseEC:2.7.1.160
Transfer RNA biogenesisko03016deepkoala

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