Detailed information of gene20122.t1 in Actinoscyphia liui

Genomic Location: chr5:41236549...41245760
NR annotation: XP_020910295.1, aprataxin and PNK-like factor [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8IW19Aprataxin and PNK-like factor OS=Homo sapiens OX=9606 GN=APLF PE=1 SV=1
Q9D842Aprataxin and PNK-like factor OS=Mus musculus OX=10090 GN=Aplf PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF10283zf-CCHHPBZ domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR008984Homologous_superfamilySMAD/FHA domain superfamilyInterproscan
IPR019406DomainAprataxin and PNK-like factor, PBZ domainInterproscan
IPR039253FamilyAprataxin and PNK-like factorInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21315UNCHARACTERIZEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0003906Molecular FunctionDNA-(apurinic or apyrimidinic site) endonuclease activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006302Biological Processdouble-strand break repairInterproscan
GO:0008408Molecular Function3'-5' exonuclease activityInterproscan
GO:0035861Cellular Componentsite of double-strand breakInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K13295APLF; aprataxin and PNK-like factorEC:3.1.-.-
DNA repair and recombination proteinsko03400deepkoala

TOP