Gene detail

Detailed information of gene19884.t1 in Actinoscyphia liui Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
gene19884.t1	SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED	chr5	36837038	36842627	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

gene19884.t1

CTCGAACAAGGAAGTGCCTTGAAGGTTTGAAAAATCTAATGCAATACAGAAATAAAACCCGCAGGTCGATCCCGTAAGATGCCTGACAACGTACAGCATGAGGAAGGAGAGCTTGAATACGTGAAACTAATTGTTAAGGGTGATCGCAATGAAGTTTGGGAGGCGAAATGGAAAGATCGTATGGTGGCAGCCAAACGCATCAACGACAAGTATTTCAACGGACATTACCAAACTGAAATTATACAACAGTACACAGAGGAACTTAAGAAGGAATGGCAGGTTTTACGGAACTTGGTTCATCCCAACATACTCAGAATGTACACTGTTTTATTTCCACCGAACAGATCGCCTGTCATTGTTACAGAACTATTGGAATGTGACTTGAGAAGTTTCATCTCAAAATCGACAACGACACCCAAAGTACTGCCCCACCAAGTAAAATTAATCGCATTAGGAGTAGCAGAAGGGCTAGAGTATTTGCACAGTTTTGAGTCTCCCATAGTGCACCGAGATCTTGCAACTAAGAATATTTTGCTGACAGCTGATGGTCACCCAAAGATTGCAGATGTTGGGAATGCTAAAGTATTCTTTGCAGGTAAAGACGACTATGCTAGTACCAATCCTGGTACTCCTGTGTACTCTGCACCAGAAACCCATCCAGCACTTGCAAATAATTTTGGCGAGGCCAGGTATGGAGTCAAAGTTGATATATTCTCTTTTGGTGTTGTTCTAATGGTTCTAATAATTGGCCATGAGCCTCGTGTAATTTCACTGACCCCTCTGAAAGGTGGCAAAAAAGGAGGCAAGCTTAGTTTAGAAATGCAGAGAAGGAAACAAGATATAGATGAAATGGGAAATCATTCACTAAAACAGCTTGTTCTTGACTGTCTTCTTGAGAAAAGCTCCAAGCGACCAAGTGCAAATCAGATAGTCAAAAAACTCCATGAATGTCAACTATGTCCTACTGACAATGGCAGTCATTGTGGGGCAAGTGCCACTTCATTTCCTGGTCCTCAAATTCCAGATACAAATGAAAATGTTCCAATGATTTCTCAACAGTGTAGTTTTGAAAAGGTCTCTTCTCAATATCATTATGACCACAAATTTAAAGTTCTTTTGATTGGCAATAGTGGCGTTGGGAAAACATGCTTGTTACAAAAACTTAGAGACCCTGGATATAACCACACTTCCTCAGTGGCCACTCTAGGGATTGATCCTTGGAAACAAGCATTCAAATACAACTCTAAGTTTGTTGAGCTGCAGATTGTTGACACTGCTGGTCAAGAGCAGTTCTTTTCCATTCAACCTCTTTACTTCCGTGATATCCAAGGAATGTTTTTGGTGTTTGATGTTACATCACAGTTCACATTTGAGAAACTGAATCACTGGATTGCATTTGCCAAGCAGTACTTTTCTGAGAAGTGTGTTCATGTAATTCTAGTTGGGAATAAAGTTGACTGCAAAGATAGAGGCATGAAGGTTAAAAGAGACATCTCCAATCAACAAGGTCAGGAGTTTGCTGACAAGCATGGATACCCATATGTAGAAACAAGTGTTACGAATGAATATGCCGATACTATCATGGCTATGTATGAAAAAATGGTAGAAATGCTAATACAGACTGCTGATCCTGAGGCTGTTCATGTTGCTGTTAAAGCTTCTAAAGATACTGTTAAACTGGAGGATACCTGTAATTCAAAATCAAAATGCCCTTGTTCAAGGTCATTCTGGTCATAGTCATGAAGCCTGTTCCACATGCATGCAGTCAGATTACATGCAAACTGCAGAGCTGATGAAACACATTGATATAACTACAGTTATAGTACTTACAGTACTCAAGACACCCTCTAAACTACCTTACTGCTTGATGGTTATTGGATAATTCCAAATTTTGGTTTTTGCAAGGCACCTAATTTAATTCTGCCTCTAAATATTATAGATATAAATGATTTTACAATTTAAAGATAATTATTTCTATTATTTTATTTTTTATAAACTTGTGAGCATTATTTTATAAAATTTTATTTTAGTTTTAACTTCATATTACGCTTAAAGAGAATGATAGAATCGAAAATAGGATAGTATTTTAATCACAATTGAAATACATTAAATCAAAGACACATTATAAAGGTTAGTATTTTTATTCCACTGGAAACGGTAACCCTGTGGTTATCATAGAACCAACCAAGACCGGAAATGACGTCAATAATTATTTAGAGTAGATTTTAAATTCTAGTTTATTTAACAAACTGGAAAATAAACCTATTAGGTCATGTTTTTATATTGTTATTAAACTCTGTACATATCATAAAAGGAAGATGATATTTAGTTTTACATAAATTACCGACCATTGGATCTTATGTTCGCCAATAAGAGTATTGTACTATTGTATGTATAGTTTCTTTCTTTTGTAAACATGTTTATGACGCCTCTTTTCAAACATGAGCTATAATTATTGGTCTTGAAGTTCATTTATATTAAAATTGCTGCTATCACCCAATCAAATCAGTTAAAAAGAGTAACCTGCTGATTGCTGACCGGTGGCTGCGTGCCCCTGGAGATTCTCCAGAGTGATTAGGCTGGACACTGAAACTGTCATAATACACCTGTCAAAAAAAGTTCCCATTGATTTCTGTTCAAGCATCCTATCTTCATCGTCCCGGCTGTCTAATCGAAGAGAACGGTTGTAGAATGGTGGAAACTATGAATGGTGTCGTCCAGCGAACAGTCAATGGGTCGTGCAGCGATGACAGCAAATTTGAGGAAAAATCTTTACAAGAAACTGAAGAGAAATGTCAGTCAGATGTATGTAGGCCATTATGCTGGGACGAGGTCCCGTGTCAATTCCGAGAGCAGTTTATCATTCGTGGGTACAGAAAACCTTATACGTCTGCTTACCACTGCATCACGAGTGCGTTTATGGCCCGCAACGAGACCGTGAACTTTTGGACACACTTCATTCCTTTCCTTTTGTTCATAGTGCGTTTCACGGTGTTATTCACCCGCGAGCCATTTGACCCTTATACCTATCCTCTGTTGTCCTTTGCTGTGGGGATCTGTGGATTTTTACTGATGAGCTCGGGTGCTCATCTGTTTAATTCCATGTCTCCGAGAACAAGACATGTTTGCTTCTTCTGCGACTATTGTGCTATCAGTGTTTACAGTGTTGGGGCTGGAATGGCATTCTACTCCTACGGCCGTCCCGTTCCTGAAGGAGACAACATAGGCCGTAGCTTCTTCTCCCCAGGCGGCTACCTTGCAGGATCAATCCTAGTGTCGTTCATCTCGACATATTTTTGCTGCGCCTCCAGACACCGATGGCCTAAACTGAAGTACGTTATAAGAACCGGCTGCTTTGTCTTAGCATTCTTTTTTAATTGCTCCCCATATTTGTACCGAGTAGCTGTTGAAGGCATTGCGTCTATTGACCCATTGGCTTGGTCATACTTCAAGAGGCACAGCCTCTTTTACCTGATTGCCGCGTTGGCTAACACAACACGGATGCCAGAAAGACTAATGCCCGGTGTTTTTGACATTGTGGGACATAGCCATAATTTCCTGCATGTGTTTACGGCGTTAGGAGTGTCAGACCAGTTCACGGCGATGGCCATTGAGATGCATCATCGACGTCCTTCACTCGAGCATCTTGGTGATAGTTTTCTGTCGAGTAACAGTCTGATGATGATGATTGCAGTGTCGATTTTGAATATTCTGATTGTCGTTTGGTTTGGTGTGCTTCTCAAGTCGGACAAAGAAGAAGAATATAAAGACCTGTAAATAAACATGCAGTTTTATGTCGTGAAATTATTTTCAATATTCTCAATGGGAAATCATGTATTTTTCGTCGAAAATTTATCATAATGAAAACGATTTACCACATTGAAGTAATTTTGGATGTTTCGGGTTTAATAGTCAGCAGTAAAGAAATCTTGACAAAACGAACGAATGATTTAATACGCTTTTTCGGTGTAATCGTCTGTTTTCAACATTAATTATTTATTACAATAAGAAGTAAATCACGAAGAATTCTATTTTCCCGGGTAAAGTATGATCCCTTAATTTTGTAAAATTCCCGCAAAATACTTAGACTTATGTATGTTTATTTAAATGGCGAAATAAAATATTACAGACCTG

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00069	Pkinase	Protein kinase domain	Domain	Interproscan
PF00071	Ras	Ras family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000719	Domain	Protein kinase domain	Interproscan
IPR001806	Family	Small GTPase	Interproscan
IPR005225	Domain	Small GTP-binding protein domain	Interproscan
IPR008266	Active_site	Tyrosine-protein kinase, active site	Interproscan
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR020635	Domain	Tyrosine-protein kinase, catalytic domain	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR051681	Family	Serine/Threonine Kinases and Pseudokinases	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR44329	SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003924	Molecular Function	GTPase activity	Interproscan
GO:0004672	Molecular Function	protein kinase activity	Interproscan
GO:0004674	Molecular Function	protein serine/threonine kinase activity	Interproscan
GO:0004713	Molecular Function	protein tyrosine kinase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0005525	Molecular Function	GTP binding	Interproscan
GO:0006468	Biological Process	protein phosphorylation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-