Detailed information of gene19711.t1 in Actinoscyphia liui

Genomic Location: chr5:34607881...34647404
NR annotation: XP_031557799.1, nidogen-like [Actinia tenebrosa]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
C0HL13Low-density lipoprotein receptor-related protein 2 OS=Sus scrofa OX=9823 GN=LRP2 PE=1 SV=1
A1Z877Nidogen OS=Drosophila melanogaster OX=7227 GN=Ndg PE=1 SV=1
P98157Low-density lipoprotein receptor-related protein 1 OS=Gallus gallus OX=9031 GN=LRP1 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12946EGF_MSP1_1MSP1 EGF domain 1DomainInterproscan
PF07474G2FG2F domainDomainInterproscan
PF00058Ldl_recept_bLow-density lipoprotein receptor repeat class BRepeatInterproscan
PF12947EGF_3EGF domainDomainInterproscan
PF06119NIDONidogen-likeFamilyInterproscan
PF07645EGF_CACalcium-binding EGF domainDomainInterproscan
PF00754F5_F8_type_CF5/8 type C domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000033RepeatLDLR class B repeatInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR024730DomainMerozoite surface protein, EGF domain 1Interproscan
IPR000421DomainCoagulation factor 5/8 C-terminal domainInterproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR000152PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR009017Homologous_superfamilyGreen fluorescent proteinInterproscan
IPR011042Homologous_superfamilySix-bladed beta-propeller, TolB-likeInterproscan
IPR006605DomainG2 nidogen/fibulin G2FInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR009030Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan
IPR024731DomainEGF domainInterproscan
IPR003886DomainNIDO domainInterproscan
IPR002889DomainCarbohydrate-binding WSCInterproscan
IPR008979Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan
IPR049883DomainNOTCH1 EGF-like calcium-binding domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24039FIBRILLIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0007160Biological Processcell-matrix adhesionInterproscan

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