Detailed information of gene19700.t1 in Actinoscyphia liui

Genomic Location: chr5:34475880...34477181
NR annotation: XP_031573373.1, trimethyllysine dioxygenase, mitochondrial-like, partial [Actinia tenebrosa]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q91ZE0Trimethyllysine dioxygenase, mitochondrial OS=Mus musculus OX=10090 GN=Tmlhe PE=1 SV=2
Q5F4B3Trimethyllysine dioxygenase, mitochondrial OS=Gallus gallus OX=9031 GN=TMLHE PE=2 SV=1
Q9NVH6Trimethyllysine dioxygenase, mitochondrial OS=Homo sapiens OX=9606 GN=TMLHE PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF06155GBBH-like_NGamma-butyrobetaine hydroxylase-like, N-terminalDomainInterproscan
PF02668TauDTaurine catabolism dioxygenase TauD, TfdA familyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR042098Homologous_superfamilyTaurine dioxygenase TauD-like superfamilyInterproscan
IPR050411FamilyAlpha-ketoglutarate-dependent hydroxylasesInterproscan
IPR010376DomainGamma-butyrobetaine hydroxylase-like, N-terminalInterproscan
IPR038492Homologous_superfamilyGBBH-like, N-terminal domain superfamilyInterproscan
IPR003819DomainTauD/TfdA-like domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10696GAMMA-BUTYROBETAINE HYDROXYLASE-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0045329Biological Processcarnitine biosynthetic processInterproscan
GO:0016491Molecular Functionoxidoreductase activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K00474TMLHE; trimethyllysine dioxygenaseEC:1.14.11.8
Lysine degradationko00310deepkoala

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