Detailed information of gene19582.t2 in Actinoscyphia liui Gene info
Gene IDAnnotationChromosomeStartEndStrand
gene19582.t2WD REPEAT-CONTAINING PROTEIN 27chr53310135533123706+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00400WD40WD domain, G-beta repeatRepeatInterproscan
PF14529Exo_endo_phos_2Endonuclease-reverse transcriptase DomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001680RepeatWD40 repeatInterproscan
IPR005135DomainEndonuclease/exonuclease/phosphataseInterproscan
IPR011011Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR019786Conserved_siteZinc finger, PHD-type, conserved siteInterproscan
IPR019787DomainZinc finger, PHD-fingerInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR042411FamilyWD repeat-containing protein 27Interproscan

PANTHER
PANTHER termDescriptionSource
PTHR44525WD REPEAT-CONTAINING PROTEIN 27Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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