Detailed information of gene19337.t1 in Actinoscyphia liui

Genomic Location: chr5:30801010...30815930
NR annotation: XP_020909215.1, metastasis-associated protein MTA3 [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q62599Metastasis-associated protein MTA1 OS=Rattus norvegicus OX=10116 GN=Mta1 PE=1 SV=1
Q13330Metastasis-associated protein MTA1 OS=Homo sapiens OX=9606 GN=MTA1 PE=1 SV=2
Q8K4B0Metastasis-associated protein MTA1 OS=Mus musculus OX=10090 GN=Mta1 PE=1 SV=1
 Gene family
Gene familySubfamily
Transcription Factors Familyzf-C2H2
Transcription Factors FamilyMYB

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF17226MTA_R1MTA R1 domainDomainInterproscan
PF00249Myb_DNA-bindingMyb-like DNA-binding domainDomainInterproscan
PF01448ELM2ELM2 domainFamilyInterproscan
PF00096zf-C2H2Zinc finger, C2H2 typeDomainInterproscan
PF01426BAHBAH domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR040138FamilyMesoderm induction early response protein/metastasis-associated proteinInterproscan
IPR013087DomainZinc finger C2H2-typeInterproscan
IPR035170DomainMetastasis-associated protein MTA1, R1 domainInterproscan
IPR000679DomainZinc finger, GATA-typeInterproscan
IPR001005DomainSANT/Myb domainInterproscan
IPR000949DomainELM2 domainInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR001025DomainBromo adjacent homology (BAH) domainInterproscan
IPR036236Homologous_superfamilyZinc finger C2H2 superfamilyInterproscan
IPR043151Homologous_superfamilyBromo adjacent homology (BAH) domain superfamilyInterproscan
IPR017884DomainSANT domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10865METASTASIS-ASSOCIATED PROTEIN AND MESODERM INDUCTION EARLY RESPONSE PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000122Biological Processnegative regulation of transcription by RNA polymerase IIInterproscan
GO:0003713Molecular Functiontranscription coactivator activityInterproscan
GO:0003714Molecular Functiontranscription corepressor activityInterproscan
GO:0005654Cellular ComponentnucleoplasmInterproscan
GO:0016575Biological Processobsolete histone deacetylationInterproscan
GO:0016581Cellular ComponentNuRD complexInterproscan
GO:0042826Molecular Functionhistone deacetylase bindingInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0043565Molecular Functionsequence-specific DNA bindingInterproscan
GO:0003682Molecular Functionchromatin bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11660MTA; metastasis-associated protein MTA-Chromosome and associated proteinsko03036deepkoala

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