Detailed information of gene19239.t1 in Actinoscyphia liui

Genomic Location: chr5:29784376...29800100
NR annotation: XP_020898182.1, MMS19 nucleotide excision repair protein homolog [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q0V9L1MMS19 nucleotide excision repair protein homolog OS=Xenopus tropicalis OX=8364 GN=mms19 PE=2 SV=2
Q6DCF2MMS19 nucleotide excision repair protein homolog OS=Xenopus laevis OX=8355 GN=mms19 PE=2 SV=1
Q96T76MMS19 nucleotide excision repair protein homolog OS=Homo sapiens OX=9606 GN=MMS19 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF14500MMS19_NDos2-interacting transcription regulator of RNA-Pol-IIDomainInterproscan
PF12460MMS19_CRNAPII transcription regulator C-terminalRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR039920FamilyDNA repair/transcription protein MET18/MMS19Interproscan
IPR029240DomainMMS19, N-terminalInterproscan
IPR024687DomainMMS19, C-terminalInterproscan
IPR011989Homologous_superfamilyArmadillo-like helicalInterproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12891DNA REPAIR/TRANSCRIPTION PROTEIN MET18/MMS19Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016226Biological Processiron-sulfur cluster assemblyInterproscan
GO:0097361Cellular Componentcytosolic [4Fe-4S] assembly targeting complexInterproscan
GO:0097428Biological Processprotein maturation by iron-sulfur cluster transferInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K15075MET18, MMS19; DNA repair/transcription protein MET18/MMS19-DNA repair and recombination proteinsko03400deepkoala

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