Detailed information of gene18841.t1 in Actinoscyphia liui

Genomic Location: chr5:24653073...24661781
NR annotation: XP_032221958.2, H/ACA ribonucleoprotein complex subunit 2-like protein [Nematostella vectensis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q6P8C4H/ACA ribonucleoprotein complex subunit 2-like protein OS=Xenopus tropicalis OX=8364 GN=nhp2 PE=2 SV=1
Q6NTV9H/ACA ribonucleoprotein complex subunit 2-like protein OS=Xenopus laevis OX=8355 GN=nhp2 PE=2 SV=1
Q5RC65H/ACA ribonucleoprotein complex subunit 2 OS=Pongo abelii OX=9601 GN=NHP2 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01248Ribosomal_L7AeRibosomal protein L7Ae/L30e/S12e/Gadd45 familyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR029064Homologous_superfamilyRibosomal protein eL30-like superfamilyInterproscan
IPR018492FamilyRibosomal protein eL8/Nhp2 familyInterproscan
IPR004038DomainRibosomal protein eL8/eL30/eS12/Gadd45Interproscan
IPR050257FamilyEukaryotic ribosomal RNA-processing and assembly proteinInterproscan
IPR002415FamilyH/ACA ribonucleoprotein complex, subunit Nhp2-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23105RIBOSOMAL PROTEIN L7AE FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000469Biological Processobsolete cleavage involved in rRNA processingInterproscan
GO:0000470Biological Processmaturation of LSU-rRNAInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0022625Cellular Componentcytosolic large ribosomal subunitInterproscan
GO:0031118Biological ProcessrRNA pseudouridine synthesisInterproscan
GO:0031120Biological ProcesssnRNA pseudouridine synthesisInterproscan
GO:0031429Cellular Componentbox H/ACA snoRNP complexInterproscan
GO:0034513Molecular Functionbox H/ACA snoRNA bindingInterproscan
GO:0005730Cellular ComponentnucleolusInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11129NHP2, NOLA2; H/ACA ribonucleoprotein complex subunit 2-DNA replication proteinsko03032deepkoala

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