Detailed information of gene18738.t1 in Actinoscyphia liui Gene info
Gene IDAnnotationChromosomeStartEndStrand
gene18738.t1PROPERDINchr52321778723223363+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00089TrypsinTrypsinDomainInterproscan
PF00090TSP_1Thrombospondin type 1 domainDomainInterproscan
PF13306LRR_5BspA type Leucine rich repeat region (6 copies)RepeatInterproscan
PF13855LRR_8Leucine rich repeatRepeatInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000436DomainSushi/SCR/CCP domainInterproscan
IPR000483DomainCysteine-rich flanking region, C-terminalInterproscan
IPR000884RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR001254DomainSerine proteases, trypsin domainInterproscan
IPR001314FamilyPeptidase S1A, chymotrypsin familyInterproscan
IPR001611RepeatLeucine-rich repeatInterproscan
IPR003591RepeatLeucine-rich repeat, typical subtypeInterproscan
IPR009003Homologous_superfamilyPeptidase S1, PA clanInterproscan
IPR018114Active_siteSerine proteases, trypsin family, histidine active siteInterproscan
IPR026906RepeatBspA-type LRR regionInterproscan
IPR032675Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR035976Homologous_superfamilySushi/SCR/CCP superfamilyInterproscan
IPR036383Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR043504Homologous_superfamilyPeptidase S1, PA clan, chymotrypsin-like foldInterproscan
IPR052065FamilyComplement and asymmetry regulatorInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR22906PROPERDINInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0004252Molecular Functionserine-type endopeptidase activityInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0006508Biological ProcessproteolysisInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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