| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| gene18546.t1 | TRANSPOSABLE ELEMENT-RELATED | chr5 | 20388534 | 20389592 | - |
| CDS | |||||
| gene18546.t1 | |||||
| Transcript |
| gene18546.t1 |
| Protein |
| gene18546.t1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF09339 | HTH_IclR | IclR helix-turn-helix domain | Domain | Interproscan |
| PF13358 | DDE_3 | DDE superfamily endonuclease | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR005471 | Domain | Transcription regulator IclR, N-terminal | Interproscan |
| IPR013324 | Homologous_superfamily | RNA polymerase sigma factor, region 3/4-like | Interproscan |
| IPR036397 | Homologous_superfamily | Ribonuclease H superfamily | Interproscan |
| IPR038717 | Domain | Tc1-like transposase, DDE domain | Interproscan |
| IPR052338 | Family | Transposase_5 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR23022 | TRANSPOSABLE ELEMENT-RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
| GO:0003677 | Molecular Function | DNA binding | Interproscan |
| GO:0006355 | Biological Process | regulation of DNA-templated transcription | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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