Gene detail

Detailed information of gene17271.t1 in Actinoscyphia liui Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
gene17271.t1	ELONGATION FACTOR G, MITOCHONDRIAL	chr4	60243497	60259620	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

gene17271.t1

ATGTTACCTATTGTGTTACATATTGTGTTACCTATTGTGTTACCTATTGTGTTACCTATTGTGCTACCCATTGTGCTACCTATTGTGCTACCTATTGTGTTACCTATTGTGTTACCTATTGTGTTACCTATTGTGCTACCCATTGTGCTACCTATTGTGCTACCCATTGTGCTACCCATTGTGCTACCCATTGTGCTACCCATTGTGCTACCTATTGTGCTACCTATTGTGCTACCTATTGTGCTACCTATTGTGTTACCTATTGTGTTACCCATTGTGCTACCCATTGTGCTACCCATTGTGCTACCCATTGTGCTACCTATTGTGTTACCTATTGTGTTACCTATTGTGCTACCCATTGTGCTACCTATTGTGCTACCTATTGTGTTACCTATTGTGTTACCTATTGTGTTACGTATTGTGTTACCTATTGTGCTACACTGTACAAATGATTTGGATCAGTTTTCTAAAGCAATCAACAGATTTACTAGAGAAGACCCAACATTTAAAGTTCGTTTTGATGATGAAAGTAAAGAGACTATTATATCAGGAATGGGAGAACTACATTTGGATGTTTATATTGAGCGCATGATGATGGAGTACAACTGTCCTGTTGCATCAGGGAATCCAAAAGTAGCATTTAGAGAAACTGTCACCAGAGAATCAAGGTTTGATTTCACTCATAAAAAGCAAACAGGAGGTTCTGGTCAATTTGCTCGTATAATTGGTAAAATAGAGGTGAGTCCTTGTTAACCATGGCTATTTTCACATGATCACCAAACATTTTGTATTTTTATTTATTGAAGAATAAACTCACTATATGTGCAGTTTTAGTGCACAGAGGGATTGATAAAATTAGAACAGTCCTGAGAGAAGTGTTGGAGAAGCATGATGCATAGTGGAGTTCTTCATATTGCTTCTAAAATTGCACAGTGGACAAGTTTTCTATTTATTTTATAAAATACATTAAAAAACACACAATTAGAATGTTTTAGGAGTAAATATATTATGTATTGTAATTTAACGATCATTAAAAGAACAAAATAAACAATATCAGCTGGAAATGGAATATACAACTTGTACTAAGAAAATGTCAGTTCAAATCAATTATCTAAACTTTCTCGTTGTTTACTGAGATGGAACTCGTTGAGCTGAAAAAGTTGATGTTGATGACTGAACTGAAAAAGAATCAATGAAAGTACATTCTTGCAAAATTGACTTCAGCTTCATGTGCTCCTGGATTTGAAATGCCCTGAAGCACTTCAGACTCTAGGGCTGAGAATTGTAGTGCTGAAGGCTCACTGGATCCTTGTGAACAGTGATGTGACAGATTTTTCAGAATTCAATGCCATATTTTTTTGCCATAGAAGGATTGCTGTCAATCATACATGCACTATGATTTATATATACACAATTTTACTGCCTTGCTGATCTTAGTCATCATGCTTCCTAAAAGTGGACAATATCTGTACCAACATGGTTCACCTGAATTCTTTTCACGCCAATCATGTCTGGAAAATTGAAAGAAATCTTCACACTTCGGGTTCAGTTAGGAGGTGCAGATACAGGAAAAAGCGTGACCGTTTTCCGAATGACCGTCTTCCGAACCGGCGGTTTTTGTAACTTTAACCCATTGACTCCTGGTTTTTTTTGGCATTTTAAGCCATTTTTGAAGGGTAAACAGCTCCTTAGAAAAAAATTTCTCGAAATTTGCCGTTACCAAGGAAACTGTCGCTGTTCTGTATACCTATGGGCTCAAGTTCACATACTGGTATTCAATTCCATCGCTAGTTCATTTCGGTAAGGAACTACAGCGATGTGAATTCGGCCAAAATGGCTAAACAAGATTTATCTAAGCTATTATCCATCTTTGAAAAGGGCTGGAGGACATCTTTAAGTCCGTTGAAGGCAAACAATACCATTTTCTCTCTGAGAGAGAACTATGGGAGGCGATTACGAAGTCAGTTCGTCATCTACCACGCGATTATGCAAATGAGATGGCGAATTTCGAATCGACCTCATTCCTTCGTCAACGATGGATTCCAAAGGCTACCACAGCATTTTTCGGACTCCCTAAGGTTCAAAGAATGGAAAGAGCCCAAAATTTTTTGCGTAGCTGTGGTAGGCCGTGGACTTCTTCTAAATCTTGTAAACAGGACTGAGGGGGGTTCCCTATGTCGAAAATGTCCACTTTTACCCATAATTCCTTTCGGTCAGGGAGCGTGAATTCGAGGATTGTAAAAATGGCATAGAAAGAAGGGCTGTTGTTCGGCCCGTTCATGAAGCAAGTGTGAAAAAAGTCAATAGAAGTCAAGAGCTTGGACTGAATATTGCTGTGAGTGTGAAGGTTTGCTTCGAAATCGATGATTTTGATGAAAAATCTCAAGGCGAAAATCGGGTATTTTTGGTCTCGTTCAATGACGTCAAAACGCGAATTTTTGACTTTCGTCAAAATGGAACGATGTTTTTCCACCGAAAACCAGAATTCTAGTGGGTTTTTCAAGTGCCAAGATTTTGTTCATCTACTAGAAAGTGATTTGAACGGGTTTACCTAAAACCCTGAATCCGGAATCGGAATCCGGAACCGGAAACGGAATCCGGAATCCGGAATCCGGAATGAGACACGGAATACTAAAACCCGGAATCATCGAAAATACAATATATATATATATATTAAACAAAAATACATTATATTGATATATTTAATATTGGTGTATGACCTGTGAACCGATGTATGGAAAATTGTAATTTAACGGTACGTCTTCTCCAGTCGTCTATCATTTGTTGGCTAAGGATTACCAAGGATTACATGTTATTTACCGACTGAGAGGTCCGGATAGCGAAAAACCCGCGAATGTACGGTCCGTTTTCAAGACCGAGGGCACAGTTTTTTTTATTTCCGGATCGATCTTTAGCCGGTAAATAACACATTTTTTTTATTTTCACGACACAATATAAGAAAATTCGCGAAACAAATTGATACCGTGGACCCGTGGTCAGAGATAGGAAAATACGGCCCGCTCCAACAACCAATCAGAGCGCGCGATTTCTTAGGATACCGGACTGGTATATACCACACAAGTGAATAGCACTTTTCGCGCACTCTGATTGGCTACTCAATCTCAGGATATCCTTCACTATTCACGTCCGAACAAGATGGCTTCGCGTTTCGCCATCATTATTTTGAAAATAAAACTCATATTTTTGGCTGTCTATTCACTTGTGTGGTATATACTAAAACAATTATTCACCAAAGTGGAGGTGAGTAGTGGTGGATATTTACCGACGCGCAAATTATTACAGTGGAACCCGCTTTATCTGATGGACACCCGCTAATACGCACACTTCGTTATAATGGCCGTGGCTTCTACATTTTGGCCGGGACAAAAAACGGATGATTTTGACAATGGCCCAAAGATTTTTTTAAATTCCCCGCTTTGACGCCTGCAGTGTGACTGGCGTGCGGACTGACATGCGCAGTACGTTTTTCTGCCCTGCTACCTCGTTCCCAAGGTCTTCTCTGTATCCGACATCATGGCAGCATTCTCGTACCCAGACCCTTCTCATTAAATCGATTTGGTCAATGAGAAGGGTCTGGGTACGAGAACACATTATGAATTCAACATGGCGGACGTACATCAGCAACGTACATATGTTATTGCTATGATGCTCAACGTCTTTATAATACATCACTCGAAAACCAAAACAATACACCAGATTTAAACATTCGAGTTTATATCAGATTTAAACAACTTCCTGTGCAG

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03764	EFG_IV	Elongation factor G, domain IV	Domain	Interproscan
PF14492	EFG_III	Elongation Factor G, domain III	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005517	Domain	Translation elongation factor EFG/EF2, domain IV	Interproscan
IPR009022	Domain	Elongation factor G, domain III	Interproscan
IPR014721	Homologous_superfamily	Small ribosomal subunit protein uS5 domain 2-type fold, subgroup	Interproscan
IPR020568	Homologous_superfamily	Ribosomal protein uS5 domain 2-type superfamily	Interproscan
IPR035647	Homologous_superfamily	EF-G domain III/V-like	Interproscan
IPR041095	Domain	Elongation Factor G, domain II	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43636	ELONGATION FACTOR G, MITOCHONDRIAL	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003746	Molecular Function	translation elongation factor activity	Interproscan
GO:0003924	Molecular Function	GTPase activity	Interproscan
GO:0005525	Molecular Function	GTP binding	Interproscan
GO:0005739	Cellular Component	mitochondrion	Interproscan
GO:0070125	Biological Process	mitochondrial translational elongation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-