Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-Yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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Genomic Location: chr4:52900982...52902302
NR annotation: CAB3986317.1, Transposable element Tcb1 transposase [Paramuricea clavata]
| CDS |
| gene16890.t1 |
| Transcript |
| gene16890.t1 |
| Protein |
| gene16890.t1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF13358 | DDE_3 | DDE superfamily endonuclease | Domain | Interproscan |
| PF01498 | HTH_Tnp_Tc3_2 | Transposase | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR038717 | Domain | Tc1-like transposase, DDE domain | Interproscan |
| IPR047655 | Family | Transposase IS630-like | Interproscan |
| IPR002492 | Domain | Transposase, Tc1-like | Interproscan |
| IPR052338 | Family | Transposase_5 | Interproscan |
| IPR036397 | Homologous_superfamily | Ribonuclease H superfamily | Interproscan |
| IPR009057 | Homologous_superfamily | Homeobox-like domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR23022 | TRANSPOSABLE ELEMENT-RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003677 | Molecular Function | DNA binding | Interproscan |
| GO:0006313 | Biological Process | DNA transposition | Interproscan |
| GO:0015074 | Biological Process | DNA integration | Interproscan |
| GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |