Detailed information of gene16728.t1 in Actinoscyphia liui

Genomic Location: chr4:50331529...50365628
NR annotation: KXJ16525.1, Pseudouridylate synthase 7-like protein [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9H0K6Pseudouridylate synthase PUS7L OS=Homo sapiens OX=9606 GN=PUS7L PE=1 SV=1
Q8CE46Pseudouridylate synthase PUS7L OS=Mus musculus OX=10090 GN=Pus7l PE=1 SV=1
Q1L8I0Pseudouridylate synthase PUS7L OS=Danio rerio OX=7955 GN=pus7l PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01142TruDtRNA pseudouridine synthase D (TruD)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001656FamilyPseudouridine synthase, TruDInterproscan
IPR042214Homologous_superfamilyPseudouridine synthase, TruD, catalytic domainInterproscan
IPR011760DomainPseudouridine synthase, TruD, insertion domainInterproscan
IPR020103Homologous_superfamilyPseudouridine synthase, catalytic domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13326TRNA PSEUDOURIDINE SYNTHASE DInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0001522Biological Processpseudouridine synthesisInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0009451Biological ProcessRNA modificationInterproscan
GO:0009982Molecular Functionpseudouridine synthase activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K06176truD, PUS7; tRNA pseudouridine13 synthaseEC:5.4.99.27
Transfer RNA biogenesisko03016deepkoala

TOP