Detailed information of gene16576.t1 in Actinoscyphia liui

Genomic Location: chr4:47008762...47029228
NR annotation: XP_031555207.1, DNA repair protein complementing XP-G cells homolog [Actinia tenebrosa]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P14629DNA excision repair protein ERCC-5 homolog OS=Xenopus laevis OX=8355 GN=ercc5 PE=2 SV=1
P35689DNA excision repair protein ERCC-5 OS=Mus musculus OX=10090 GN=Ercc5 PE=1 SV=4
P28715DNA excision repair protein ERCC-5 OS=Homo sapiens OX=9606 GN=ERCC5 PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00752XPG_NXPG N-terminal domainFamilyInterproscan
PF00867XPG_IXPG I-regionFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036279Homologous_superfamily5'-3' exonuclease, C-terminal domain superfamilyInterproscan
IPR001044FamilyXPG/Rad2 endonuclease, eukaryotesInterproscan
IPR029060Homologous_superfamilyPIN-like domain superfamilyInterproscan
IPR006085DomainXPG, N-terminalInterproscan
IPR008918Conserved_siteHelix-hairpin-helix motif, class 2Interproscan
IPR006086DomainXPG-I domainInterproscan
IPR006084FamilyXPG/Rad2 endonucleaseInterproscan
IPR019974Conserved_siteXPG conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR16171DNA REPAIR PROTEIN COMPLEMENTING XP-G CELLS-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003697Molecular Functionsingle-stranded DNA bindingInterproscan
GO:0004519Molecular Functionendonuclease activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006289Biological Processnucleotide-excision repairInterproscan
GO:0004518Molecular Functionnuclease activityInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0016788Molecular Functionhydrolase activity, acting on ester bondsInterproscan
GO:0004520Molecular FunctionDNA endonuclease activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K10846ERCC5, XPG, RAD2; DNA excision repair protein ERCC-5-DNA repair and recombination proteinsko03400deepkoala

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