Detailed information of gene16255.t1 in Actinoscyphia liui

Genomic Location: chr4:41606771...41637129
NR annotation: XP_031554854.1, lysine-specific demethylase 6A-like isoform X1 [Actinia tenebrosa]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O70546Lysine-specific demethylase 6A OS=Mus musculus OX=10090 GN=Kdm6a PE=1 SV=2
O15550Lysine-specific demethylase 6A OS=Homo sapiens OX=9606 GN=KDM6A PE=1 SV=2
P79457Histone demethylase UTY OS=Mus musculus OX=10090 GN=Uty PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13431TPR_17Tetratricopeptide repeatRepeatInterproscan
PF21322KDM6_C-helLysine-specific demethylase 6/UTY, C-terminal helical domainDomainInterproscan
PF21326KDM6_GATALKDM6, GATA-likeDomainInterproscan
PF00515TPR_1Tetratricopeptide repeatRepeatInterproscan
PF02373JmjCJmjC domain, hydroxylaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR003347DomainJmjC domainInterproscan
IPR048562DomainLysine-specific demethylase 6A/B-like, C-terminal helical domainInterproscan
IPR048560DomainLysine-specific demethylase 6A/B-like, GATA-likeInterproscan
IPR019734RepeatTetratricopeptide repeatInterproscan
IPR051630FamilyTranscriptional Corepressor and Histone DemethylaseInterproscan
IPR046941Homologous_superfamilyLysine-specific demethylase 6, GATA-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14017LYSINE-SPECIFIC DEMETHYLASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0010468Biological Processregulation of gene expressionInterproscan
GO:0031490Molecular Functionchromatin DNA bindingInterproscan
GO:0044666Cellular ComponentMLL3/4 complexInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11447UTX, KDM6A; lysine-specific demethylase 6AEC:1.14.11.68
Chromosome and associated proteinsko03036deepkoala

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