Detailed information of gene16188.t1 in Actinoscyphia liui

Genomic Location: chr4:40709077...40737875
NR annotation: XP_020908798.1, DNA repair protein XRCC1 [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P18887DNA repair protein XRCC1 OS=Homo sapiens OX=9606 GN=XRCC1 PE=1 SV=3
O54935DNA repair protein XRCC1 OS=Cricetulus griseus OX=10029 GN=XRCC1 PE=2 SV=1
Q60596DNA repair protein XRCC1 OS=Mus musculus OX=10090 GN=Xrcc1 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF16589BRCT_2BRCT domain, a BRCA1 C-terminus domainFamilyInterproscan
PF00533BRCTBRCA1 C Terminus (BRCT) domainFamilyInterproscan
PF01834XRCC1_NXRCC1 N terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036420Homologous_superfamilyBRCT domain superfamilyInterproscan
IPR001357DomainBRCT domainInterproscan
IPR002706DomainDNA-repair protein Xrcc1, N-terminalInterproscan
IPR045080DomainXRCC1, first (central) BRCT domainInterproscan
IPR008979Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11370DNA-REPAIR PROTEIN XRCC1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000012Biological Processsingle strand break repairInterproscan
GO:0003684Molecular Functiondamaged DNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006284Biological Processbase-excision repairInterproscan
GO:0006303Biological Processdouble-strand break repair via nonhomologous end joiningInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K10803XRCC1; DNA-repair protein XRCC1-DNA repair and recombination proteinsko03400deepkoala

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