Gene detail

Detailed information of gene16091.t1 in Actinoscyphia liui

Genomic Location: chr4:39558015...39573120
NR annotation: KAJ7331669.1, hypothetical protein OS493_019262 [Desmophyllum pertusum]

Gene Structure

More details in Jbrowse

Sequence

CDS

gene16091.t1

ATGTCTGAAAAAGAGGGAAAAGGTTTTGTTCCTCACAGCCACATTCCATATGGTGCAGATGGGTCTGGGTACTATTCTGATCATATGACATCAAATTACACCATCAGCAACAACGCCATACCGTTACTTGTGGATGCAGTTCACTCTACTGACATCCAACCAGGGTCTGTGTTCACCATAGTGGATTATGGGGCAGCTGATGGTGGTACTTCAATGCCGCTCATGTACGCATGCGTGAAAGCCATACGAGAGAAGTATGGGGATGAGTTGCCAATCAACATCATCTACGAGGACCAACCAGTCAATGATTTCAAGTCTTTGTTTGTGAGGTTACAAGGTACACAATATGAATACACTTGTTCTCTGCACCACACATCATATCACAGGACCAGTACTACAACTTTGGATTTCCATTGTGTATTTTCTTTGTCAGGTCTCATCCCTGGTCCGCCATCTTATCTTGCGGACTTTTCCAACGTCTTTGTCATGGCCTGTGGTACGAATTACTACCAGCATTGTTTTGCCAGGAACAGTGTTAATCTGGGGTTTTCTAGCTGCAGTATGCAGTATTTGAGTAAAAAGCCATGTGACCTCACAGATTCTCTCTTCGTTCACCTTAACACTGTCCCAGAAGAGAATGAGAAATTCCGCGAGCAAGCTGCAAGAGACTGGGAACGACTGTTAGTCAATCGAGCAGACGAGCTAGTTGCAGGTGGGAAGATGGTTTTCGTCATGCTGTCAAGGGATGAGCAGTGGAGTGACGAGGAACTTCAATCAAATTGGATTAAGTGTGTCCTGTTGTCTACTGTTTGGAAAGGACTTGTTGATGATGGGACCATTACTGAGAAAGAATTCAAAAACACAAACTTCAACGCTTACTTCAGGACCTCAAATGAACTCAAGAAACCATTCGAGTGTAAAACCTCACCTGTCGTTCAAGCTGGTTTGGAATTGGTTGCCATAGAAACTCGTACGATCCCCGATGGGTTCAAAGACAAGTGGCTAAATGAAGAAAACGATCCTAAAGAATACGCTAAACTTTATGTATCGTCAGTCCCTCACAGCCATATTCCATATGGTGCAGATGGGTCTGGATATTATTCTGATAACAACTTGACATGTTACAATATCAACAACGCTGCCATACCGTTACTTGTGGATACAGTTCAATCCACTGACATCCAACCAGGGTCTGTGTTCACCATAGTGGATTATGGGGCAGCTGATGGTGGTACTTCAATGCCGCTCATGTACGCATGCGTGAAAGCTATACGAGAGAAGTATGGGGATGAGTTGCCAATCAACATCATCTACGAGGACCAACCAGTCAATGATTTCAAGTCTTTGTTTATGAGGTTACAAGGTCTCATCCCTGGTCCGCCATCTTATTTTGCGGACTTTTCCAACGTCTTTGTCATGGCCTGTGGTACGAATTACCACCAGCATTGTTTTGCCAGGAACAGTGTTAATCTGGGGTTTTCTAGTTGCAGTATGCATTGGCTTAGTGAGAAGCCATGCGACCTCACGGATTCTGTCTTCGTTCACCTCAACACTGTCCCAGAAGAGAATGAGAAATTCCATGAGCAAGCTGCAAGAGACTGGGAACGACTATTGCTCAATCGAGCATCTGAGCTAAAGCCAGGTGGGAAGATGGTTTTCGCTATGTTGTCAAGTGATGAGCAGTGGAGTGACGAGAAACTGCGATCAAATATTTCTTCCTTGATATCAACTCTTTGGAAAGGATTTGTTGATGATGGGACCACTACTGAGAAAGAGTTCAAAAATACAAACTTCAACGCTTACTTCAGGACCTCAAATGAACTCAAGAAACCATTCGAGTGTAAAACCTCACCTGTCATTCAAGCTGGTTTGGAATTGGTTGCCTTAGAAACTCGTACGATATCTTGTGGAGTCAAAGATAAGTGGCTAAAAGAGAAAAGCAGTCTTAAAGGATACGCTGAATGTTATGTGGCGTATATACGTACTTGGAGCCATAGTACGTTAATGTCAGGTTTGTCAGACATTCGTTCTAAAGAGGAAAAAAAACAGATTGTAGACGAGTTTTTTCGTCGCATGGAGGCTGAAATAACCAATAGCAAGAACCCAGAATACTTTCCTCCAAATGTAACTGTACAAAATGTAACCGTACAAAAGCAAGATGACGGTGACAATACAAACGCTGAGTAA

Transcript

gene16091.t1

ATTAGACACTAGTGATAGATTCACAACACAAAGATCGAAGCAGTGATGTCTGAAAAAGAGGGAAAAGGTTTTGTTCCTCACAGCCACATTCCATATGGTGCAGATGGGTCTGGGTACTATTCTGATCATATGACATCAAATTACACCATCAGCAACAACGCCATACCGTTACTTGTGGATGCAGTTCACTCTACTGACATCCAACCAGGGTCTGTGTTCACCATAGTGGATTATGGGGCAGCTGATGGTGGTACTTCAATGCCGCTCATGTACGCATGCGTGAAAGCCATACGAGAGAAGTATGGGGATGAGTTGCCAATCAACATCATCTACGAGGACCAACCAGTCAATGATTTCAAGTCTTTGTTTGTGAGGTTACAAGGTACACAATATGAATACACTTGTTCTCTGCACCACACATCATATCACAGGACCAGTACTACAACTTTGGATTTCCATTGTGTATTTTCTTTGTCAGGTCTCATCCCTGGTCCGCCATCTTATCTTGCGGACTTTTCCAACGTCTTTGTCATGGCCTGTGGTACGAATTACTACCAGCATTGTTTTGCCAGGAACAGTGTTAATCTGGGGTTTTCTAGCTGCAGTATGCAGTATTTGAGTAAAAAGCCATGTGACCTCACAGATTCTCTCTTCGTTCACCTTAACACTGTCCCAGAAGAGAATGAGAAATTCCGCGAGCAAGCTGCAAGAGACTGGGAACGACTGTTAGTCAATCGAGCAGACGAGCTAGTTGCAGGTGGGAAGATGGTTTTCGTCATGCTGTCAAGGGATGAGCAGTGGAGTGACGAGGAACTTCAATCAAATTGGATTAAGTGTGTCCTGTTGTCTACTGTTTGGAAAGGACTTGTTGATGATGGGACCATTACTGAGAAAGAATTCAAAAACACAAACTTCAACGCTTACTTCAGGACCTCAAATGAACTCAAGAAACCATTCGAGTGTAAAACCTCACCTGTCGTTCAAGCTGGTTTGGAATTGGTTGCCATAGAAACTCGTACGATCCCCGATGGGTTCAAAGACAAGTGGCTAAATGAAGAAAACGATCCTAAAGAATACGCTAAACTTTATGTATCGTCAGTCCCTCACAGCCATATTCCATATGGTGCAGATGGGTCTGGATATTATTCTGATAACAACTTGACATGTTACAATATCAACAACGCTGCCATACCGTTACTTGTGGATACAGTTCAATCCACTGACATCCAACCAGGGTCTGTGTTCACCATAGTGGATTATGGGGCAGCTGATGGTGGTACTTCAATGCCGCTCATGTACGCATGCGTGAAAGCTATACGAGAGAAGTATGGGGATGAGTTGCCAATCAACATCATCTACGAGGACCAACCAGTCAATGATTTCAAGTCTTTGTTTATGAGGTTACAAGGTCTCATCCCTGGTCCGCCATCTTATTTTGCGGACTTTTCCAACGTCTTTGTCATGGCCTGTGGTACGAATTACCACCAGCATTGTTTTGCCAGGAACAGTGTTAATCTGGGGTTTTCTAGTTGCAGTATGCATTGGCTTAGTGAGAAGCCATGCGACCTCACGGATTCTGTCTTCGTTCACCTCAACACTGTCCCAGAAGAGAATGAGAAATTCCATGAGCAAGCTGCAAGAGACTGGGAACGACTATTGCTCAATCGAGCATCTGAGCTAAAGCCAGGTGGGAAGATGGTTTTCGCTATGTTGTCAAGTGATGAGCAGTGGAGTGACGAGAAACTGCGATCAAATATTTCTTCCTTGATATCAACTCTTTGGAAAGGATTTGTTGATGATGGGACCACTACTGAGAAAGAGTTCAAAAATACAAACTTCAACGCTTACTTCAGGACCTCAAATGAACTCAAGAAACCATTCGAGTGTAAAACCTCACCTGTCATTCAAGCTGGTTTGGAATTGGTTGCCTTAGAAACTCGTACGATATCTTGTGGAGTCAAAGATAAGTGGCTAAAAGAGAAAAGCAGTCTTAAAGGATACGCTGAATGTTATGTGGCGTATATACGTACTTGGAGCCATAGTACGTTAATGTCAGGTTTGTCAGACATTCGTTCTAAAGAGGAAAAAAAACAGATTGTAGACGAGTTTTTTCGTCGCATGGAGGCTGAAATAACCAATAGCAAGAACCCAGAATACTTTCCTCCAAATGTAACTGTACAAAATGTAACCGTACAAAAGCAAGATGACGGTGACAATACAAACGCTGAGTAA

Protein

Uniprot

Uniprot term	Description
Q9FKR0	Probable S-adenosylmethionine-dependent methyltransferase At5g38780 OS=Arabidopsis thaliana OX=3702 GN=At5g38780 PE=2 SV=1
Q9LS10	Probable S-adenosylmethionine-dependent methyltransferase At5g38100 OS=Arabidopsis thaliana OX=3702 GN=At5g38100 PE=2 SV=1
Q9FKD0	Probable S-adenosylmethionine-dependent methyltransferase At5g37970 OS=Arabidopsis thaliana OX=3702 GN=At5g37970 PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03492	Methyltransf_7	SAM dependent carboxyl methyltransferase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR029063	Homologous_superfamily	S-adenosyl-L-methionine-dependent methyltransferase superfamily	Interproscan
IPR005299	Family	SAM dependent carboxyl methyltransferase	Interproscan
IPR042086	Homologous_superfamily	Methyltransferase, alpha-helical capping domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR31009	S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0008168	Molecular Function	methyltransferase activity	Interproscan
GO:0008757	Molecular Function	S-adenosylmethionine-dependent methyltransferase activity	Interproscan
GO:0032259	Biological Process	methylation	Interproscan