Detailed information of gene16074.t1 in Actinoscyphia liui

Genomic Location: chr4:39295088...39308721
NR annotation: XP_020907968.1, complement C1q subcomponent subunit C isoform X2 [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O35235Tumor necrosis factor ligand superfamily member 11 OS=Mus musculus OX=10090 GN=Tnfsf11 PE=1 SV=2
Q9ESE2Tumor necrosis factor ligand superfamily member 11 OS=Rattus norvegicus OX=10116 GN=Tnfsf11 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01391CollagenCollagen triple helix repeat (20 copies)RepeatInterproscan
PF00229TNFTNF(Tumour Necrosis Factor) family DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006052DomainTumour necrosis factor domainInterproscan
IPR008160RepeatCollagen triple helix repeatInterproscan
IPR008983Homologous_superfamilyTumour necrosis factor-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11471TUMOR NECROSIS FACTOR FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005164Molecular Functiontumor necrosis factor receptor bindingInterproscan
GO:0006955Biological Processimmune responseInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

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