Detailed information of gene16051.t1 in Actinoscyphia liui

Genomic Location: chr4:39033713...39034029
NR annotation: XP_034017716.1, DNA-directed RNA polymerases I, II, and III subunit RPABC5 [Thalassophryne amazonica]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q32P78DNA-directed RNA polymerases I, II, and III subunit RPABC5 OS=Bos taurus OX=9913 GN=POLR2L PE=1 SV=1
Q6QN04DNA-directed RNA polymerases I, II, and III subunit RPABC5 OS=Chinchilla lanigera OX=34839 GN=POLR2L PE=3 SV=1
P62875DNA-directed RNA polymerases I, II, and III subunit RPABC5 OS=Homo sapiens OX=9606 GN=POLR2L PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01194RNA_pol_NRNA polymerases N / 8 kDa subunitDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000268FamilyDNA-directed RNA polymerase subunit RPABC5/Rpb10Interproscan
IPR020789Binding_siteRNA polymerases, subunit N, zinc binding siteInterproscan
IPR023580Homologous_superfamilyRNA polymerase subunit RPB10Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23431DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC5 FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003899Molecular FunctionDNA-directed 5'-3' RNA polymerase activityInterproscan
GO:0006351Biological ProcessDNA-templated transcriptionInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0001054Molecular FunctionRNA polymerase I activityInterproscan
GO:0001055Molecular FunctionRNA polymerase II activityInterproscan
GO:0001056Molecular FunctionRNA polymerase III activityInterproscan
GO:0005665Cellular ComponentRNA polymerase II, core complexInterproscan
GO:0005666Cellular ComponentRNA polymerase III complexInterproscan
GO:0005736Cellular ComponentRNA polymerase I complexInterproscan
GO:0006360Biological Processtranscription by RNA polymerase IInterproscan
GO:0006366Biological Processtranscription by RNA polymerase IIInterproscan
GO:0042797Biological ProcesstRNA transcription by RNA polymerase IIIInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K03007RPABC5, RPB10, POLR2L; DNA-directed RNA polymerases I, II, and III subunit RPABC5-DNA repair and recombination proteinsko03400deepkoala

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