Detailed information of gene15946.t1 in Actinoscyphia liui Gene info
Gene IDAnnotationChromosomeStartEndStrand
gene15946.t1METHYL-CPG-BINDING PROTEINchr43718887937209829+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Transcription Factors FamilyMBD

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00024PAN_1PAN domainDomainInterproscan
PF00730HhH-GPDHhH-GPD superfamily base excision DNA repair proteinDomainInterproscan
PF01429MBDMethyl-CpG binding domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001739DomainMethyl-CpG DNA bindingInterproscan
IPR003265DomainHhH-GPD domainInterproscan
IPR003609DomainPAN/Apple domainInterproscan
IPR011257Homologous_superfamilyDNA glycosylaseInterproscan
IPR012314DomainPeptidase M12B, GON-ADAMTSsInterproscan
IPR014716Homologous_superfamilyFibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1Interproscan
IPR016177Homologous_superfamilyDNA-binding domain superfamilyInterproscan
IPR036056Homologous_superfamilyFibrinogen-like, C-terminalInterproscan
IPR045138FamilyMethyl-CpG binding protein MeCP2/MBD4Interproscan

PANTHER
PANTHER termDescriptionSource
PTHR15074METHYL-CPG-BINDING PROTEINInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0004222Molecular Functionmetalloendopeptidase activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0006284Biological Processbase-excision repairInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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