Detailed information of gene15572.t1 in Actinoscyphia liui

Genomic Location: chr4:32743212...32747104
NR annotation: XP_020908834.1, general transcription factor IIF subunit 2 [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q03123General transcription factor IIF subunit 2 OS=Xenopus laevis OX=8355 GN=gtf2f2 PE=2 SV=1
Q2T9L9General transcription factor IIF subunit 2 OS=Bos taurus OX=9913 GN=GTF2F2 PE=2 SV=1
P13984General transcription factor IIF subunit 2 OS=Homo sapiens OX=9606 GN=GTF2F2 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF17683TFIIF_beta_NTFIIF, beta subunit N-terminusFamilyInterproscan
PF02270TFIIF_betaTFIIF, beta subunit HTH domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011039Homologous_superfamilyTranscription Factor IIF, Rap30/Rap74, interactionInterproscan
IPR040504DomainTFIIF, beta subunit, N-terminalInterproscan
IPR040450DomainTFIIF beta subunit, HTH domainInterproscan
IPR003196FamilyTranscription initiation factor IIF, beta subunitInterproscan
IPR036390Homologous_superfamilyWinged helix DNA-binding domain superfamilyInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10445GENERAL TRANSCRIPTION FACTOR IIF SUBUNIT 2Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0006367Biological Processtranscription initiation at RNA polymerase II promoterInterproscan
GO:0005674Cellular Componenttranscription factor TFIIF complexInterproscan
GO:0006366Biological Processtranscription by RNA polymerase IIInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K03139TFIIF2, GTF2F2, TFG2; transcription initiation factor TFIIF subunit betaEC:5.6.2.-
Transcription machineryko03021deepkoala

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