Detailed information of gene15383.t1 in Actinoscyphia liui

Genomic Location: chr4:30362456...30369803
NR annotation: KXJ16652.1, Protein SOX-15 [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q91731Transcription factor Sox-11-A OS=Xenopus laevis OX=8355 GN=sox11-a PE=1 SV=2
Q04891Transcription factor SOX-13 OS=Mus musculus OX=10090 GN=Sox13 PE=1 SV=4
P40649Transcription factor Sox-13 OS=Xenopus laevis OX=8355 GN=sox13 PE=2 SV=3
 Gene family
Gene familySubfamily
Transcription Factors FamilybHLH
Transcription Factors FamilyHMG

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00010HLHHelix-loop-helix DNA-binding domainDomainInterproscan
PF00505HMG_boxHMG (high mobility group) boxDomainInterproscan
PF07496zf-CWCW-type Zinc FingerDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011124DomainZinc finger, CW-typeInterproscan
IPR009071DomainHigh mobility group box domainInterproscan
IPR036910Homologous_superfamilyHigh mobility group box domain superfamilyInterproscan
IPR036638Homologous_superfamilyHelix-loop-helix DNA-binding domain superfamilyInterproscan
IPR050140FamilySRY-related HMG-box transcription factorsInterproscan
IPR011598DomainMyc-type, basic helix-loop-helix (bHLH) domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10270SOX TRANSCRIPTION FACTORInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0046983Molecular Functionprotein dimerization activityInterproscan

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