Detailed information of gene14665.t1 in Actinoscyphia liui

Genomic Location: chr4:19047155...19067145
NR annotation: XP_020915464.1, DNA-directed RNA polymerase, mitochondrial [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8BKF1DNA-directed RNA polymerase, mitochondrial OS=Mus musculus OX=10090 GN=Polrmt PE=1 SV=1
O00411DNA-directed RNA polymerase, mitochondrial OS=Homo sapiens OX=9606 GN=POLRMT PE=1 SV=2
O24600DNA-directed RNA polymerase 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPOT3 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13812PPR_3Pentatricopeptide repeat domainRepeatInterproscan
PF00940RNA_polDNA-dependent RNA polymeraseFamilyInterproscan
PF01535PPRPPR repeatRepeatInterproscan
PF14700RPOL_NDNA-directed RNA polymerase N-terminalDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002092FamilyDNA-directed RNA polymerase, phage-typeInterproscan
IPR029262DomainDNA-directed RNA polymerase, N-terminalInterproscan
IPR002885RepeatPentatricopeptide repeatInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR037159Homologous_superfamilyDNA-directed RNA polymerase, N-terminal domain superfamilyInterproscan
IPR046950DomainDNA-directed RNA polymerase, C-terminal domain, phage-typeInterproscan
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10102DNA-DIRECTED RNA POLYMERASE, MITOCHONDRIALInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0001018Molecular Functionmitochondrial promoter sequence-specific DNA bindingInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003899Molecular FunctionDNA-directed 5'-3' RNA polymerase activityInterproscan
GO:0006351Biological ProcessDNA-templated transcriptionInterproscan
GO:0006390Biological Processmitochondrial transcriptionInterproscan
GO:0034245Cellular Componentmitochondrial DNA-directed RNA polymerase complexInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K10908POLRMT, RPO41; DNA-directed RNA polymerase, mitochondrialEC:2.7.7.6
Mitochondrial biogenesisko03029deepkoala

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