Detailed information of gene14328.t2 in Actinoscyphia liui

Genomic Location: chr4:12170260...12276926
NR annotation: KXJ10080.1, RNA-directed DNA polymerase from mobile element jockey [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q96PZ7CUB and sushi domain-containing protein 1 OS=Homo sapiens OX=9606 GN=CSMD1 PE=1 SV=3
G8HTB6ZP domain-containing protein OS=Acropora millepora OX=45264 PE=1 SV=1
Q20176Zinc metalloproteinase nas-39 OS=Caenorhabditis elegans OX=6239 GN=nas-39 PE=2 SV=4
 Gene family
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|PHD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00431CUBCUB domainDomainInterproscan
PF00008EGFEGF-like domainDomainInterproscan
PF00100Zona_pellucidaZona pellucida-like domainFamilyInterproscan
PF14529Exo_endo_phos_2Endonuclease-reverse transcriptase DomainInterproscan
PF00628PHDPHD-fingerDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000742DomainEGF-like domainInterproscan
IPR000859DomainCUB domainInterproscan
IPR001507DomainZona pellucida domainInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR000152PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR011011Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR035914Homologous_superfamilySpermadhesin, CUB domain superfamilyInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR001965DomainZinc finger, PHD-typeInterproscan
IPR005135DomainEndonuclease/exonuclease/phosphataseInterproscan
IPR019786Conserved_siteZinc finger, PHD-type, conserved siteInterproscan
IPR019787DomainZinc finger, PHD-fingerInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR042235Homologous_superfamilyZona pellucida, ZP-C domainInterproscan
IPR009030Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24255COMPLEMENT COMPONENT 1, S SUBCOMPONENT-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0004252Molecular Functionserine-type endopeptidase activityInterproscan
GO:0005615Cellular Componentextracellular spaceInterproscan

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