Gene detail

Detailed information of gene14291.t1 in Actinoscyphia liui

Genomic Location: chr4:11491649...11508826
NR annotation: KXJ19708.1, Latrophilin-3 [Exaiptasia diaphana]

Gene Structure

More details in Jbrowse

Sequence

CDS

gene14291.t1

ATGAAAGTTGGTGCAGACTTGTTTAAACTTGACGGTAAGGACTACTTACTAGTTATTGACTACATGTCTAGCTATCCTGAAATAGCGCTATTAGCAGAAAATACAACATCAAGAAATGTCATCACTCATATGAAGTCCATTTGTGTCAGACATGGAATACCTAGTACCATGGTAACTGACAATGGACCCCAATTTGTAAGTGAAGAATTCAAAGTATTCACCACCACTTATGGAATTCAATACAAGTTCTCAAGTCCCTATCATCCAAAGACCAATGGACAAGCAGAAAAAGGTGTTGGAATAGTAAAAAACTTACTCAGGAAATCATTAGAAACCAAAGAAGACCCATACTTGGCACTATTAGCAATCAGAGGAGATCGATGTTGGAGTAAGAAGGCAGTTATAGTTGAAGAGACATCTCCACGAGCTTACAAAGTCAAGACAGAAGATGGTGTTGTGTATGAAAGAAACCGTATACATTTACTACCAACCAGAGAAAGGTTTGAAGAAACACTTGACAACATTATGGAGAAACTTACAACAGATGAACCAAACGGTTCTGGAGATACCACAAATAACAAAGATGCCACACCCACCATCGAGTCTAATCCTACTAACTTCCTTCTCATAGCAAGCAACCTTCTTGACGACCAGAACAACATAGAAATGAAGCTGCTACAACAGTCCGATAACACAACGACGTTGCTGATGTCTGCATTGGATGGTTTTAGTCTACAAGCCGCAGGAAGTCTGGAAACTAGTAAAATCCACACCAAACAATTTGTGGCAACAAACCTTGTCATGGGTATCTCGGTTTTCCTGAATTCTTCGACAACGGACATCAGGTTCCCGGATTACAACGATAGCCATTTGACGTCTATAAGTGAGTGGAATTCGTTCGACAGAAGTTACATCGTCTTGCCAAAATCAGCTTTTGACAATTCCAAGAAATCAGTCATTCAAGTTAAAAGGGTTTCAAGTATTCTCTATAGGACCTTGGCGTCGTTTCTTAACATAGAAAGTGCGTACGATCACGTTGGTAGTGGCTTTGAGTTAAGTTCTAAAATCATCTCAGCTTCTGTTAAACCTGTCGTCCCCTTTGAAGATCCTGTTGTTACCATTTACGACAAAGTTAAGAACGACAACAAAACACCTGCTTGTGTGTTTTGGGATTTTACACTGAATTCTCATGGTGGTGGCTGGTCACGTGACGGGTGTCGTCTTTCATCACGTGATGGCAGTAGAGTCACGTGTGAATGTGATCACCTGACAAACTTTGCTGTGCTCATGGGAATATATGATTTTAAGGAGCACGAACTACCTCTACGCATCATTACGTTCATTGGCTGTGGCTTGTCACTACTTGGTCTTGTCATTACCCTGGTCGTTCATTTCATTTTCTGGAGACATTTAAAATCGGAGAAAACCATCATCCACGTCAATCTATGCGTTGCTCTTGTCGCTGCAAATGCCGTTCTACTGGGTGGACTGGACAGGACTTCAAACAAGATCATTTGTAAAACTGTTGCAGCATTGTTGCATTATTTCTTCATGTCCGCGGTGGCCTGGATGCTAGTGGAAGGAATACAGATCTACGTCGCTATAGTGTTGGTGTTTCAAATAGAACGAAAACGAAAATACTTCTACTTGATTGGCTGGGGTTCCCCTCTAGTTATTGTAGGTATAGCAATGGCTGCAACACAGTTGGACGGCTATGGTGGAGAAAAGGCCTGTTGGTTGTCCTCAGATAAAGGTTTGATATATGCCTTCATTGGTCCAGTATTGGCTGTTGTACTGATCAACATCATTATCTTTGTCATGGTTGTGCGTGCTATGATGACGACACAAAAGATGTTATCAGCAGACGATAAGCAGAAAGCGAGGTTAGCTGCTAAATGCTGTGCTGTACTTCTACCATTACTTGGCTTAACCTGGGTGTTTGGTGTTCTTGCTGTAGATCGTAATGTGGTCGTGTTCTTATATCTGTTCGCCATCTTGAACTCTCTTCAGCACATGCAATTTCTAACAAAAAATTGTAAACAATAA

Transcript

gene14291.t1

Protein

Uniprot

Uniprot term	Description
Q9HAR2	Adhesion G protein-coupled receptor L3 OS=Homo sapiens OX=9606 GN=ADGRL3 PE=1 SV=2
O14514	Adhesion G protein-coupled receptor B1 OS=Homo sapiens OX=9606 GN=ADGRB1 PE=1 SV=2
C0HL12	Adhesion G protein-coupled receptor B1 OS=Rattus norvegicus OX=10116 GN=Adgrb1 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01825	GPS	GPCR proteolysis site, GPS, motif	Motif	Interproscan
PF16489	GAIN	GPCR-Autoproteolysis INducing (GAIN) domain	Domain	Interproscan
PF00002	7tm_2	7 transmembrane receptor (Secretin family)	Family	Interproscan
PF00665	rve	Integrase core domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR000832	Family	GPCR, family 2, secretin-like	Interproscan
IPR017981	Domain	GPCR, family 2-like, 7TM	Interproscan
IPR000203	Conserved_site	GPS motif	Interproscan
IPR032471	Domain	GAIN domain, N-terminal	Interproscan
IPR046338	Homologous_superfamily	GAIN domain superfamily	Interproscan
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR001584	Domain	Integrase, catalytic core	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12011	ADHESION G-PROTEIN COUPLED RECEPTOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0004930	Molecular Function	G protein-coupled receptor activity	Interproscan
GO:0007186	Biological Process	G protein-coupled receptor signaling pathway	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0004888	Molecular Function	transmembrane signaling receptor activity	Interproscan
GO:0007166	Biological Process	cell surface receptor signaling pathway	Interproscan
GO:0015074	Biological Process	DNA integration	Interproscan
GO:0005887	Cellular Component	plasma membrane	Interproscan
GO:0007189	Biological Process	adenylate cyclase-activating G protein-coupled receptor signaling pathway	Interproscan