Detailed information of gene14281.t1 in Actinoscyphia liui

Genomic Location: chr4:11246637...11258549
NR annotation: XP_020915370.1, rab5 GDP/GTP exchange factor [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9JM13Rab5 GDP/GTP exchange factor OS=Mus musculus OX=10090 GN=Rabgef1 PE=1 SV=1
O18973Rab5 GDP/GTP exchange factor OS=Bos taurus OX=9913 GN=RABGEF1 PE=1 SV=1
Q9UJ41Rab5 GDP/GTP exchange factor OS=Homo sapiens OX=9606 GN=RABGEF1 PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02204VPS9Vacuolar sorting protein 9 (VPS9) domainFamilyInterproscan
PF18151DUF5601Domain of unknown function (DUF5601)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR045046FamilyVacuolar protein sorting-associated protein 9-likeInterproscan
IPR037191Homologous_superfamilyVPS9 domain superfamilyInterproscan
IPR003123DomainVPS9 domainInterproscan
IPR041545DomainRABX5, catalytic core helical domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23101RAB GDP/GTP EXCHANGE FACTORInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005085Molecular Functionguanyl-nucleotide exchange factor activityInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0016192Biological Processvesicle-mediated transportInterproscan
GO:0030139Cellular Componentendocytic vesicleInterproscan
GO:0031267Molecular Functionsmall GTPase bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K20131RABGEF1; Rab5 GDP/GTP exchange factor-Membrane traffickingko04131deepkoala

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