Gene detail

Detailed information of gene13124.t1 in Actinoscyphia liui

Genomic Location: chr3:62003019...62012389
NR annotation: XP_031574293.1, COMM domain-containing protein 3-like [Actinia tenebrosa]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

gene13124.t1

GAAGACAGTAAACTTTGTCGAACTAAAGACAACAGTACACGCTTTCTAGTCATATTGTTACTATGGAACTATCTGGTTTAGTAATAGAAGGGCTTGGTCTATGCGGAGAGTCGTCCAGACTTGGAGATCGTAGTTTTAGAGTTCTTGTTGGACTTGTTATTGACATCCTACTAAAACGCACAGACGAGGCTGCTCTGTCAGAGAGTGATGATTTTTCAAAGGTCGATGTTCCATCATTGAAGCAGATGTACACTGGTTTAGTAACACTTGTCTTGGAGACGGTAAAAACAGACTGTGACAATGCAACTATTAGCTCTACTCTAGAAGATTGTAAATGGGGAACAGATAGAATTGAATATTTCACAAAGATTTACCAGGAACAGAAACAGGAGATAGAGGCTATGCTTAGCAGTACTGGCAGTTCGTACCCACATGTTGTAGATGTTGATTGGAGGCTGGATTATTACATAAAGAATAATCACATGGACAAAGTCAATCAACCTATGTACCTAATAACACTTAAAACTGAGGAAAGTGGTTGTGTAGCTGGTAAAGATGTACAGTTCTCATGTTCCATGGAACAGCTTCAGGATCTTGTAGGAAAACTTAAAGAAGCCTGTAAAACTCTTGAACGAACAGCAAGTTCTTAACCAAGAAGGCATTAACCTCGAGCAGTGTCTTCTTGTAGCAACATGTAAAATTTTATCTAAATTGGCTTATACAGTGTACTCTTTTCTATCATTCATGAGCAATACAATATGTAGTCAACGGTTTAGTAAATATAGCATATTCAAGGAGGGGAGGGGAGGGGTGTGAGTATAATTTAGTCTATATAGCGGGACCACTAAGTGCCAAGGGACTCGATGTGTTTGTTATAACAAGAGTTTGTTATAAATGAAACCTGGCTGTTAGAATATCATGTTATCCCAGGGACTTTGTTTAATTCATGGTTCCCTAACACCGTAGTTACTGTTGCTATATACATGTCTGACAAGCTATCACATTTTACCAGAAATCGGCACCAGAGAAAGTGCGATCACAGAACATTGTAATGGAGTTTTTATTAGATGTACATGTACATACATGTACTCTAACCTTCTATTAAAACCATAGTTCATAAAAATTCAAAACTTTTCAGTAAACTACAATTTAAGGATCTTGTTTGTGGGACCTGAATTATTCCATTGGGAATACTGACTATGGGCTGATTGGTTGGGCGTTTGTTGGCTATTCTAAATGTTATAGTGGAACTATGAATAGGGGTTCCACTATATACTCTAATGTATCTTGGTCTTATGATCATTTGATAGCTAGGTAGTTTATCTTGCATACAGAAAGATATATTTTTAATAAAAATATATGGATTAACAATATAATGTATTGCATTGTTGTCTACTAAGGGTGTGTTCGATTTCCCTATTCCAGAATAGGAATACACGAAATAATCACTTGGAATCGTTCACTTAGCAGAATTTAACATTCCAAACTGTTTCAGTACCTTTATAAGAATAAACCAAGGAGTCTATTGCTTTCTCAGTGGAGAACAGCTGCTTTGCAGCGATTTAGGAATGCTATTCCATGTATTCTCATTCCAGAATACGGTCAATCGATATACCATTTCATGTAATGTATTACACTGAATGTATGTTAGGAGCAAATTAAAATCTGGCTACTTAATTTGAAAAGGAAAACCCTCAGACAATAGAACAGAATGCCATACTAACTGCATGGATGTTATTGCACCAAAGGTTGTCAACTTCTTCTCTCATGGATATAGGAAGCCACTATTATAGATAAGGCTAAACCCCAACTTTGGAGGCTCATATTTTTTTGGGGGGAAAATCAAAGGCGAGAAAGCTGCATGCAGGCGTTCCTGCTAGGGGGCATGAGGAACGCCTGGGCTACATTGAACAGAACTTCCACTTGATATTGAAATACCAGATAACTCTAAATGAAGAAGTAATAAAACAACCAACAAACATTCCATGGCCCTTACTTGGGTAATAATGATACTGCATGCATTTTGTCTAGTTTGCTATTGTGTGTTGTACATACAATAGAATAATGAATTATATAATTGTTTAATAGCAAGAAAAAAAATTGAAACACATATGGAAAATAAATATGAGCTCTAACAATGACTGATTTCATGCTGTAACTTATGCTGTGTTTACACTGAACCATTTTACCTCGGCAGATCAGTAACAGATATACATATATGTTGAGTGTAAATACCATTTGAAACCTAAGTAAATGTCAACGAAAAGAAAATCTACTGCGGTAGAGTTAAACTACTGCTTACCATTCTAAAAAGCATGGTTACTGCCAAGGTGTTGAGGGACATGCATTATAACATCACAGAGTTCAGTACATGAACACAAACTTGAAATTATTCTTGATAAATATTGTATTTGAATTTGAAAGTCATTTGCTGTCGGGTTAAAATTGTACAATCGCCATCAACGAAAATCACCAGAAATGTCGAATCTACAACTTTGAGTTCATGCATTGTGTGTCTTGAGAGAAACTACCGCCAGACAGTTGAATCTATTCACGTCTACTGAGGTTATACGAGCCAATATATAAACAGTTTTTATAATAACCGGGAGTAGTAATGTAGACTGACCTCAGTAAACTTAAACCTCAGTAATAAATGGCTCAGTGTAAACACAGCATTAGAAATAGTCTAACTAAGGCTGGCAGACACTGGTTTCTTGTTGACAGTTCTTACTTCTATATTACATGTATGGATACACCTATTTAAAAAAACATTGGCATCTGAAATCTGAAACCTGAATCTGAGACC

Protein

Uniprot

Uniprot term	Description
Q3SZ76	COMM domain-containing protein 3 OS=Bos taurus OX=9913 GN=COMMD3 PE=2 SV=1
Q9UBI1	COMM domain-containing protein 3 OS=Homo sapiens OX=9606 GN=COMMD3 PE=1 SV=1
Q63829	COMM domain-containing protein 3 OS=Mus musculus OX=10090 GN=Commd3 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07258	COMM_domain	COMM domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR017920	Domain	COMM domain	Interproscan
IPR037355	Family	COMM domain-containing protein 3	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR31159	COMM DOMAIN-CONTAINING PROTEIN 3	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0006814	Biological Process	sodium ion transport	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K22559	COMMD3, BUP; COMM domain containing 3	-	Ubiquitin system	ko04121	deepkoala