Detailed information of gene12792.t1 in Actinoscyphia liui

Genomic Location: chr3:56172750...56179228
NR annotation: XP_020917283.1, DNA ligase 4 [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q5R6L3DNA ligase 4 OS=Pongo abelii OX=9601 GN=LIG4 PE=2 SV=1
P49917DNA ligase 4 OS=Homo sapiens OX=9606 GN=LIG4 PE=1 SV=2
Q90YB1DNA ligase 4 OS=Gallus gallus OX=9031 GN=LIG4 PE=2 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01068DNA_ligase_A_MATP dependent DNA ligase domainDomainInterproscan
PF04675DNA_ligase_A_NDNA ligase N terminusFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR044125DomainDNA Ligase 4, adenylation domainInterproscan
IPR000977FamilyDNA ligase, ATP-dependentInterproscan
IPR029710FamilyDNA ligase 4Interproscan
IPR012310DomainDNA ligase, ATP-dependent, centralInterproscan
IPR036599Homologous_superfamilyDNA ligase, ATP-dependent, N-terminal domain superfamilyInterproscan
IPR012308DomainDNA ligase, ATP-dependent, N-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45997DNA LIGASE 4Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0003910Molecular FunctionDNA ligase (ATP) activityInterproscan
GO:0071897Biological ProcessDNA biosynthetic processInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0005958Cellular ComponentDNA-dependent protein kinase-DNA ligase 4 complexInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0006297Biological Processnucleotide-excision repair, DNA gap fillingInterproscan
GO:0006303Biological Processdouble-strand break repair via nonhomologous end joiningInterproscan
GO:0032807Cellular ComponentDNA ligase IV complexInterproscan
GO:0051103Biological ProcessDNA ligation involved in DNA repairInterproscan
GO:0006310Biological ProcessDNA recombinationInterproscan

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